Gene : Eucgr.E00888 E. grandis v2.0
Defline:  (1 of 2) PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED Genomic Order:  757
Name:  ? Eucgr.E00888 Secondary Identifier:  ? PAC:32029555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00888 0.5kb upstream 0.5kb upstream 5137 true Chr05: 9303073-9308209 Eucalyptus grandis
Eucgr.E00888 0.5kb upstream 0.5kb upstream 500 false Chr05: 9303073-9303572 Eucalyptus grandis
Eucgr.E00888 0.5kb downstream 0.5kb downstream 5137 true Chr05: 9303573-9308709 Eucalyptus grandis
Eucgr.E00888 0.5kb downstream 0.5kb downstream 500 false Chr05: 9308210-9308709 Eucalyptus grandis
Eucgr.E00888 1.0kb upstream 1.0kb upstream 5637 true Chr05: 9302573-9308209 Eucalyptus grandis
Eucgr.E00888 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9302573-9303572 Eucalyptus grandis
Eucgr.E00888 1.0kb downstream 1.0kb downstream 5637 true Chr05: 9303573-9309209 Eucalyptus grandis
Eucgr.E00888 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9308210-9309209 Eucalyptus grandis
Eucgr.E00888 2.0kb upstream 2.0kb upstream 6637 true Chr05: 9301573-9308209 Eucalyptus grandis
Eucgr.E00888 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9301573-9303572 Eucalyptus grandis
Eucgr.E00888 2.0kb downstream 2.0kb downstream 6637 true Chr05: 9303573-9310209 Eucalyptus grandis
Eucgr.E00888 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9308210-9310209 Eucalyptus grandis
Eucgr.E00888 5.0kb upstream 5.0kb upstream 9637 true Chr05: 9298573-9308209 Eucalyptus grandis
Eucgr.E00888 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9298573-9303572 Eucalyptus grandis
Eucgr.E00888 5.0kb downstream 5.0kb downstream 9637 true Chr05: 9303573-9313209 Eucalyptus grandis
Eucgr.E00888 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9308210-9313209 Eucalyptus grandis
Eucgr.E00888 10.0kb upstream 10.0kb upstream 14637 true Chr05: 9293573-9308209 Eucalyptus grandis
Eucgr.E00888 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9293573-9303572 Eucalyptus grandis
Eucgr.E00888 10.0kb downstream 10.0kb downstream 14637 true Chr05: 9303573-9318209 Eucalyptus grandis
Eucgr.E00888 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9308210-9318209 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 99.0271 0.0 284.179 High High
cufflinks 34.0926 0.0 81.3234    
cufflinks 74.4743 0.0 224.053 High  
cufflinks 31.8571 0.0 75.5886   Low
cufflinks 75.1424 0.0 179.36 High  
cufflinks 36.0987 0.0 85.9162 High  

0 Strain