Gene : Eucgr.E00881 E. grandis v2.0
Defline:  (1 of 3) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  750
Name:  ? Eucgr.E00881 Secondary Identifier:  ? PAC:32029165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00881 0.5kb upstream 0.5kb upstream 3126 true Chr05: 9258763-9261888 Eucalyptus grandis
Eucgr.E00881 0.5kb upstream 0.5kb upstream 500 false Chr05: 9258763-9259262 Eucalyptus grandis
Eucgr.E00881 0.5kb downstream 0.5kb downstream 3126 true Chr05: 9259263-9262388 Eucalyptus grandis
Eucgr.E00881 0.5kb downstream 0.5kb downstream 500 false Chr05: 9261889-9262388 Eucalyptus grandis
Eucgr.E00881 1.0kb upstream 1.0kb upstream 3626 true Chr05: 9258263-9261888 Eucalyptus grandis
Eucgr.E00881 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9258263-9259262 Eucalyptus grandis
Eucgr.E00881 1.0kb downstream 1.0kb downstream 3626 true Chr05: 9259263-9262888 Eucalyptus grandis
Eucgr.E00881 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9261889-9262888 Eucalyptus grandis
Eucgr.E00881 2.0kb upstream 2.0kb upstream 4626 true Chr05: 9257263-9261888 Eucalyptus grandis
Eucgr.E00881 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9257263-9259262 Eucalyptus grandis
Eucgr.E00881 2.0kb downstream 2.0kb downstream 4626 true Chr05: 9259263-9263888 Eucalyptus grandis
Eucgr.E00881 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9261889-9263888 Eucalyptus grandis
Eucgr.E00881 5.0kb upstream 5.0kb upstream 7626 true Chr05: 9254263-9261888 Eucalyptus grandis
Eucgr.E00881 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9254263-9259262 Eucalyptus grandis
Eucgr.E00881 5.0kb downstream 5.0kb downstream 7626 true Chr05: 9259263-9266888 Eucalyptus grandis
Eucgr.E00881 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9261889-9266888 Eucalyptus grandis
Eucgr.E00881 10.0kb upstream 10.0kb upstream 12626 true Chr05: 9249263-9261888 Eucalyptus grandis
Eucgr.E00881 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9249263-9259262 Eucalyptus grandis
Eucgr.E00881 10.0kb downstream 10.0kb downstream 12626 true Chr05: 9259263-9271888 Eucalyptus grandis
Eucgr.E00881 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9261889-9271888 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.33406 0.0 13.0055   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.5214 0.0 6.61952    
cufflinks 0.121192 0.0 0.456617 Low Low
cufflinks 0.271512 0.0 0.919168 Low  
cufflinks 1.26521 0.0 3.58024    

0 Strain