Gene : Eucgr.E00854 E. grandis v2.0
Defline:  (1 of 1) PTHR10536 - DNA PRIMASE SMALL SUBUNIT Genomic Order:  726
Name:  ? Eucgr.E00854 Secondary Identifier:  ? PAC:32028765
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00854 0.5kb upstream 0.5kb upstream 7690 true Chr05: 8980672-8988361 Eucalyptus grandis
Eucgr.E00854 0.5kb upstream 0.5kb upstream 500 false Chr05: 8980672-8981171 Eucalyptus grandis
Eucgr.E00854 0.5kb downstream 0.5kb downstream 7690 true Chr05: 8981172-8988861 Eucalyptus grandis
Eucgr.E00854 0.5kb downstream 0.5kb downstream 500 false Chr05: 8988362-8988861 Eucalyptus grandis
Eucgr.E00854 1.0kb upstream 1.0kb upstream 8190 true Chr05: 8980172-8988361 Eucalyptus grandis
Eucgr.E00854 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8980172-8981171 Eucalyptus grandis
Eucgr.E00854 1.0kb downstream 1.0kb downstream 8190 true Chr05: 8981172-8989361 Eucalyptus grandis
Eucgr.E00854 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8988362-8989361 Eucalyptus grandis
Eucgr.E00854 2.0kb upstream 2.0kb upstream 9190 true Chr05: 8979172-8988361 Eucalyptus grandis
Eucgr.E00854 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8979172-8981171 Eucalyptus grandis
Eucgr.E00854 2.0kb downstream 2.0kb downstream 9190 true Chr05: 8981172-8990361 Eucalyptus grandis
Eucgr.E00854 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8988362-8990361 Eucalyptus grandis
Eucgr.E00854 5.0kb upstream 5.0kb upstream 12190 true Chr05: 8976172-8988361 Eucalyptus grandis
Eucgr.E00854 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8976172-8981171 Eucalyptus grandis
Eucgr.E00854 5.0kb downstream 5.0kb downstream 12190 true Chr05: 8981172-8993361 Eucalyptus grandis
Eucgr.E00854 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8988362-8993361 Eucalyptus grandis
Eucgr.E00854 10.0kb upstream 10.0kb upstream 17190 true Chr05: 8971172-8988361 Eucalyptus grandis
Eucgr.E00854 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8971172-8981171 Eucalyptus grandis
Eucgr.E00854 10.0kb downstream 10.0kb downstream 17190 true Chr05: 8981172-8998361 Eucalyptus grandis
Eucgr.E00854 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8988362-8998361 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063611 5270 Rosid View MSA
123741537 5271 Pentapetalae View MSA
122792233 5272 Eudicot View MSA
122044142 5273 Angiosperm View MSA
121345966 5274 Embryophyte View MSA
123424761 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.48181 0.0 6.86983    
cufflinks 1.64775 0.0 4.67029    
cufflinks 3.62914 0.0 9.20851    
cufflinks 3.99611 0.0 10.0668    
cufflinks 5.3763 0.0 12.9058    
cufflinks 0.387865 0.0 1.50917 Low Low

0 Strain