Gene : Eucgr.E00830 E. grandis v2.0
Defline:  (1 of 2) PTHR11122:SF10 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  706
Name:  ? Eucgr.E00830 Secondary Identifier:  ? PAC:32030770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00830 0.5kb upstream 0.5kb upstream 5140 true Chr05: 8766824-8771963 Eucalyptus grandis
Eucgr.E00830 0.5kb upstream 0.5kb upstream 500 false Chr05: 8766824-8767323 Eucalyptus grandis
Eucgr.E00830 0.5kb downstream 0.5kb downstream 5140 true Chr05: 8767324-8772463 Eucalyptus grandis
Eucgr.E00830 0.5kb downstream 0.5kb downstream 500 false Chr05: 8771964-8772463 Eucalyptus grandis
Eucgr.E00830 1.0kb upstream 1.0kb upstream 5640 true Chr05: 8766324-8771963 Eucalyptus grandis
Eucgr.E00830 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8766324-8767323 Eucalyptus grandis
Eucgr.E00830 1.0kb downstream 1.0kb downstream 5640 true Chr05: 8767324-8772963 Eucalyptus grandis
Eucgr.E00830 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8771964-8772963 Eucalyptus grandis
Eucgr.E00830 2.0kb upstream 2.0kb upstream 6640 true Chr05: 8765324-8771963 Eucalyptus grandis
Eucgr.E00830 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8765324-8767323 Eucalyptus grandis
Eucgr.E00830 2.0kb downstream 2.0kb downstream 6640 true Chr05: 8767324-8773963 Eucalyptus grandis
Eucgr.E00830 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8771964-8773963 Eucalyptus grandis
Eucgr.E00830 5.0kb upstream 5.0kb upstream 9640 true Chr05: 8762324-8771963 Eucalyptus grandis
Eucgr.E00830 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8762324-8767323 Eucalyptus grandis
Eucgr.E00830 5.0kb downstream 5.0kb downstream 9640 true Chr05: 8767324-8776963 Eucalyptus grandis
Eucgr.E00830 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8771964-8776963 Eucalyptus grandis
Eucgr.E00830 10.0kb upstream 10.0kb upstream 14640 true Chr05: 8757324-8771963 Eucalyptus grandis
Eucgr.E00830 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8757324-8767323 Eucalyptus grandis
Eucgr.E00830 10.0kb downstream 10.0kb downstream 14640 true Chr05: 8767324-8781963 Eucalyptus grandis
Eucgr.E00830 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8771964-8781963 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779653 5273 Angiosperm View MSA
124068691 5270 Rosid View MSA
123743686 5271 Pentapetalae View MSA
122770739 5272 Eudicot View MSA
121051304 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.72323 0.0 9.34697    
cufflinks 2.18206 0.0 6.02357   Low
cufflinks 4.46974 0.0 10.895    
cufflinks 4.06606 0.0 9.99507    
cufflinks 2.78994 0.0 7.33263    
cufflinks 4.85335 0.0 11.7333   High

0 Strain