Gene : Eucgr.E00832 E. grandis v2.0
Defline:  (1 of 110) PF00069//PF00560//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  707
Name:  ? Eucgr.E00832 Secondary Identifier:  ? PAC:32028444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00832 0.5kb upstream 0.5kb upstream 4618 true Chr05: 8776464-8781081 Eucalyptus grandis
Eucgr.E00832 0.5kb upstream 0.5kb upstream 500 false Chr05: 8776464-8776963 Eucalyptus grandis
Eucgr.E00832 0.5kb downstream 0.5kb downstream 4618 true Chr05: 8776964-8781581 Eucalyptus grandis
Eucgr.E00832 0.5kb downstream 0.5kb downstream 500 false Chr05: 8781082-8781581 Eucalyptus grandis
Eucgr.E00832 1.0kb upstream 1.0kb upstream 5118 true Chr05: 8775964-8781081 Eucalyptus grandis
Eucgr.E00832 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8775964-8776963 Eucalyptus grandis
Eucgr.E00832 1.0kb downstream 1.0kb downstream 5118 true Chr05: 8776964-8782081 Eucalyptus grandis
Eucgr.E00832 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8781082-8782081 Eucalyptus grandis
Eucgr.E00832 2.0kb upstream 2.0kb upstream 6118 true Chr05: 8774964-8781081 Eucalyptus grandis
Eucgr.E00832 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8774964-8776963 Eucalyptus grandis
Eucgr.E00832 2.0kb downstream 2.0kb downstream 6118 true Chr05: 8776964-8783081 Eucalyptus grandis
Eucgr.E00832 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8781082-8783081 Eucalyptus grandis
Eucgr.E00832 5.0kb upstream 5.0kb upstream 9118 true Chr05: 8771964-8781081 Eucalyptus grandis
Eucgr.E00832 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8771964-8776963 Eucalyptus grandis
Eucgr.E00832 5.0kb downstream 5.0kb downstream 9118 true Chr05: 8776964-8786081 Eucalyptus grandis
Eucgr.E00832 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8781082-8786081 Eucalyptus grandis
Eucgr.E00832 10.0kb upstream 10.0kb upstream 14118 true Chr05: 8766964-8781081 Eucalyptus grandis
Eucgr.E00832 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8766964-8776963 Eucalyptus grandis
Eucgr.E00832 10.0kb downstream 10.0kb downstream 14118 true Chr05: 8776964-8791081 Eucalyptus grandis
Eucgr.E00832 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8781082-8791081 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026275 5273 Angiosperm View MSA
124069725 5270 Rosid View MSA
123742624 5271 Pentapetalae View MSA
122793300 5272 Eudicot View MSA
121296256 5274 Embryophyte View MSA
123334452 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.20358 0.0 20.9092    
cufflinks 97.4958 0.0 295.424 High High
cufflinks 5.10227 0.0 15.4187    
cufflinks 36.0104 0.0 94.173    
cufflinks 3.28732 0.0 8.32107    
cufflinks 5.59616 0.0 13.0337    

0 Strain