Gene : Eucgr.E01743 E. grandis v2.0
Defline:  (1 of 1) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  1362
Name:  ? Eucgr.E01743 Secondary Identifier:  ? PAC:32028940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01743 0.5kb upstream 0.5kb upstream 6898 true Chr05: 21713173-21720070 Eucalyptus grandis
Eucgr.E01743 0.5kb upstream 0.5kb upstream 500 false Chr05: 21719571-21720070 Eucalyptus grandis
Eucgr.E01743 0.5kb downstream 0.5kb downstream 6898 true Chr05: 21712673-21719570 Eucalyptus grandis
Eucgr.E01743 0.5kb downstream 0.5kb downstream 500 false Chr05: 21712673-21713172 Eucalyptus grandis
Eucgr.E01743 1.0kb upstream 1.0kb upstream 7398 true Chr05: 21713173-21720570 Eucalyptus grandis
Eucgr.E01743 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21719571-21720570 Eucalyptus grandis
Eucgr.E01743 1.0kb downstream 1.0kb downstream 7398 true Chr05: 21712173-21719570 Eucalyptus grandis
Eucgr.E01743 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21712173-21713172 Eucalyptus grandis
Eucgr.E01743 2.0kb upstream 2.0kb upstream 8398 true Chr05: 21713173-21721570 Eucalyptus grandis
Eucgr.E01743 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21719571-21721570 Eucalyptus grandis
Eucgr.E01743 2.0kb downstream 2.0kb downstream 8398 true Chr05: 21711173-21719570 Eucalyptus grandis
Eucgr.E01743 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21711173-21713172 Eucalyptus grandis
Eucgr.E01743 5.0kb upstream 5.0kb upstream 11398 true Chr05: 21713173-21724570 Eucalyptus grandis
Eucgr.E01743 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21719571-21724570 Eucalyptus grandis
Eucgr.E01743 5.0kb downstream 5.0kb downstream 11398 true Chr05: 21708173-21719570 Eucalyptus grandis
Eucgr.E01743 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21708173-21713172 Eucalyptus grandis
Eucgr.E01743 10.0kb upstream 10.0kb upstream 16398 true Chr05: 21713173-21729570 Eucalyptus grandis
Eucgr.E01743 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21719571-21729570 Eucalyptus grandis
Eucgr.E01743 10.0kb downstream 10.0kb downstream 16398 true Chr05: 21703173-21719570 Eucalyptus grandis
Eucgr.E01743 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21703173-21713172 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068397 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1514 0.0 59.0375   High
cufflinks 18.4932 0.0 41.7722    
cufflinks 26.7793 0.0 60.6599 High High
cufflinks 19.1944 0.0 43.2455    
cufflinks 21.7187 0.0 48.7045    
cufflinks 15.9186 0.0 35.757   Low

0 Strain