Gene : Eucgr.E01717 E. grandis v2.0
Defline:  (1 of 4) PTHR22298:SF12 - ENDOGLUCANASE 12-RELATED Genomic Order:  1340
Name:  ? Eucgr.E01717 Secondary Identifier:  ? PAC:32031427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01717 0.5kb upstream 0.5kb upstream 3776 true Chr05: 21274933-21278708 Eucalyptus grandis
Eucgr.E01717 0.5kb upstream 0.5kb upstream 500 false Chr05: 21274933-21275432 Eucalyptus grandis
Eucgr.E01717 0.5kb downstream 0.5kb downstream 3776 true Chr05: 21275433-21279208 Eucalyptus grandis
Eucgr.E01717 0.5kb downstream 0.5kb downstream 500 false Chr05: 21278709-21279208 Eucalyptus grandis
Eucgr.E01717 1.0kb upstream 1.0kb upstream 4276 true Chr05: 21274433-21278708 Eucalyptus grandis
Eucgr.E01717 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21274433-21275432 Eucalyptus grandis
Eucgr.E01717 1.0kb downstream 1.0kb downstream 4276 true Chr05: 21275433-21279708 Eucalyptus grandis
Eucgr.E01717 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21278709-21279708 Eucalyptus grandis
Eucgr.E01717 2.0kb upstream 2.0kb upstream 5276 true Chr05: 21273433-21278708 Eucalyptus grandis
Eucgr.E01717 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21273433-21275432 Eucalyptus grandis
Eucgr.E01717 2.0kb downstream 2.0kb downstream 5276 true Chr05: 21275433-21280708 Eucalyptus grandis
Eucgr.E01717 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21278709-21280708 Eucalyptus grandis
Eucgr.E01717 5.0kb upstream 5.0kb upstream 8276 true Chr05: 21270433-21278708 Eucalyptus grandis
Eucgr.E01717 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21270433-21275432 Eucalyptus grandis
Eucgr.E01717 5.0kb downstream 5.0kb downstream 8276 true Chr05: 21275433-21283708 Eucalyptus grandis
Eucgr.E01717 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21278709-21283708 Eucalyptus grandis
Eucgr.E01717 10.0kb upstream 10.0kb upstream 13276 true Chr05: 21265433-21278708 Eucalyptus grandis
Eucgr.E01717 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21265433-21275432 Eucalyptus grandis
Eucgr.E01717 10.0kb downstream 10.0kb downstream 13276 true Chr05: 21275433-21288708 Eucalyptus grandis
Eucgr.E01717 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21278709-21288708 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027453 5273 Angiosperm View MSA
124064764 5270 Rosid View MSA
123739833 5271 Pentapetalae View MSA
122794164 5272 Eudicot View MSA
121297103 5274 Embryophyte View MSA
123428473 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain