Gene : Eucgr.E01677 E. grandis v2.0
Defline:  (1 of 2) PTHR34537:SF2 - FERREDOXIN-LIKE PROTEIN Genomic Order:  1309
Name:  ? Eucgr.E01677 Secondary Identifier:  ? PAC:32030984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01677 0.5kb upstream 0.5kb upstream 3368 true Chr05: 20434782-20438149 Eucalyptus grandis
Eucgr.E01677 0.5kb upstream 0.5kb upstream 500 false Chr05: 20434782-20435281 Eucalyptus grandis
Eucgr.E01677 0.5kb downstream 0.5kb downstream 3368 true Chr05: 20435282-20438649 Eucalyptus grandis
Eucgr.E01677 0.5kb downstream 0.5kb downstream 500 false Chr05: 20438150-20438649 Eucalyptus grandis
Eucgr.E01677 1.0kb upstream 1.0kb upstream 3868 true Chr05: 20434282-20438149 Eucalyptus grandis
Eucgr.E01677 1.0kb upstream 1.0kb upstream 1000 false Chr05: 20434282-20435281 Eucalyptus grandis
Eucgr.E01677 1.0kb downstream 1.0kb downstream 3868 true Chr05: 20435282-20439149 Eucalyptus grandis
Eucgr.E01677 1.0kb downstream 1.0kb downstream 1000 false Chr05: 20438150-20439149 Eucalyptus grandis
Eucgr.E01677 2.0kb upstream 2.0kb upstream 4868 true Chr05: 20433282-20438149 Eucalyptus grandis
Eucgr.E01677 2.0kb upstream 2.0kb upstream 2000 false Chr05: 20433282-20435281 Eucalyptus grandis
Eucgr.E01677 2.0kb downstream 2.0kb downstream 4868 true Chr05: 20435282-20440149 Eucalyptus grandis
Eucgr.E01677 2.0kb downstream 2.0kb downstream 2000 false Chr05: 20438150-20440149 Eucalyptus grandis
Eucgr.E01677 5.0kb upstream 5.0kb upstream 7868 true Chr05: 20430282-20438149 Eucalyptus grandis
Eucgr.E01677 5.0kb upstream 5.0kb upstream 5000 false Chr05: 20430282-20435281 Eucalyptus grandis
Eucgr.E01677 5.0kb downstream 5.0kb downstream 7868 true Chr05: 20435282-20443149 Eucalyptus grandis
Eucgr.E01677 5.0kb downstream 5.0kb downstream 5000 false Chr05: 20438150-20443149 Eucalyptus grandis
Eucgr.E01677 10.0kb upstream 10.0kb upstream 12868 true Chr05: 20425282-20438149 Eucalyptus grandis
Eucgr.E01677 10.0kb upstream 10.0kb upstream 10000 false Chr05: 20425282-20435281 Eucalyptus grandis
Eucgr.E01677 10.0kb downstream 10.0kb downstream 12868 true Chr05: 20435282-20448149 Eucalyptus grandis
Eucgr.E01677 10.0kb downstream 10.0kb downstream 10000 false Chr05: 20438150-20448149 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070213 5270 Rosid View MSA
123746811 5271 Pentapetalae View MSA
122794670 5272 Eudicot View MSA
122048192 5273 Angiosperm View MSA
121310879 5274 Embryophyte View MSA
123348261 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.42288 0.0 18.8069   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.71056 0.0 10.0931    
cufflinks 0.784736 0.0 2.54445   Low
cufflinks 2.96998 0.0 8.22623    
cufflinks 2.83226 0.0 7.86177    

0 Strain