Gene : Eucgr.E01662 E. grandis v2.0
Defline:  (1 of 3) PTHR31773:SF11 - METACASPASE-2 Genomic Order:  1297
Name:  ? Eucgr.E01662 Secondary Identifier:  ? PAC:32028146
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01662 0.5kb upstream 0.5kb upstream 3606 true Chr05: 19965730-19969335 Eucalyptus grandis
Eucgr.E01662 0.5kb upstream 0.5kb upstream 500 false Chr05: 19965730-19966229 Eucalyptus grandis
Eucgr.E01662 0.5kb downstream 0.5kb downstream 3606 true Chr05: 19966230-19969835 Eucalyptus grandis
Eucgr.E01662 0.5kb downstream 0.5kb downstream 500 false Chr05: 19969336-19969835 Eucalyptus grandis
Eucgr.E01662 1.0kb upstream 1.0kb upstream 4106 true Chr05: 19965230-19969335 Eucalyptus grandis
Eucgr.E01662 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19965230-19966229 Eucalyptus grandis
Eucgr.E01662 1.0kb downstream 1.0kb downstream 4106 true Chr05: 19966230-19970335 Eucalyptus grandis
Eucgr.E01662 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19969336-19970335 Eucalyptus grandis
Eucgr.E01662 2.0kb upstream 2.0kb upstream 5106 true Chr05: 19964230-19969335 Eucalyptus grandis
Eucgr.E01662 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19964230-19966229 Eucalyptus grandis
Eucgr.E01662 2.0kb downstream 2.0kb downstream 5106 true Chr05: 19966230-19971335 Eucalyptus grandis
Eucgr.E01662 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19969336-19971335 Eucalyptus grandis
Eucgr.E01662 5.0kb upstream 5.0kb upstream 8106 true Chr05: 19961230-19969335 Eucalyptus grandis
Eucgr.E01662 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19961230-19966229 Eucalyptus grandis
Eucgr.E01662 5.0kb downstream 5.0kb downstream 8106 true Chr05: 19966230-19974335 Eucalyptus grandis
Eucgr.E01662 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19969336-19974335 Eucalyptus grandis
Eucgr.E01662 10.0kb upstream 10.0kb upstream 13106 true Chr05: 19956230-19969335 Eucalyptus grandis
Eucgr.E01662 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19956230-19966229 Eucalyptus grandis
Eucgr.E01662 10.0kb downstream 10.0kb downstream 13106 true Chr05: 19966230-19979335 Eucalyptus grandis
Eucgr.E01662 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19969336-19979335 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073381 5270 Rosid View MSA
123741855 5271 Pentapetalae View MSA
122790648 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.7481 0.0 109.848 High  
cufflinks 62.8634 0.0 145.535 High High
cufflinks 36.733 0.0 92.6657 High  
cufflinks 67.9953 0.0 179.191 High High
cufflinks 29.8406 0.0 67.2704   Low
cufflinks 40.9798 0.0 92.3143 High  

0 Strain