Gene : Eucgr.E01600 E. grandis v2.0
Defline:  (1 of 1) PTHR31251:SF4 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 Genomic Order:  1226
Name:  ? Eucgr.E01600 Secondary Identifier:  ? PAC:32031149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01600 0.5kb upstream 0.5kb upstream 3008 true Chr05: 18227656-18230663 Eucalyptus grandis
Eucgr.E01600 0.5kb upstream 0.5kb upstream 500 false Chr05: 18227656-18228155 Eucalyptus grandis
Eucgr.E01600 0.5kb downstream 0.5kb downstream 3008 true Chr05: 18228156-18231163 Eucalyptus grandis
Eucgr.E01600 0.5kb downstream 0.5kb downstream 500 false Chr05: 18230664-18231163 Eucalyptus grandis
Eucgr.E01600 1.0kb upstream 1.0kb upstream 3508 true Chr05: 18227156-18230663 Eucalyptus grandis
Eucgr.E01600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 18227156-18228155 Eucalyptus grandis
Eucgr.E01600 1.0kb downstream 1.0kb downstream 3508 true Chr05: 18228156-18231663 Eucalyptus grandis
Eucgr.E01600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 18230664-18231663 Eucalyptus grandis
Eucgr.E01600 2.0kb upstream 2.0kb upstream 4508 true Chr05: 18226156-18230663 Eucalyptus grandis
Eucgr.E01600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 18226156-18228155 Eucalyptus grandis
Eucgr.E01600 2.0kb downstream 2.0kb downstream 4508 true Chr05: 18228156-18232663 Eucalyptus grandis
Eucgr.E01600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 18230664-18232663 Eucalyptus grandis
Eucgr.E01600 5.0kb upstream 5.0kb upstream 7508 true Chr05: 18223156-18230663 Eucalyptus grandis
Eucgr.E01600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 18223156-18228155 Eucalyptus grandis
Eucgr.E01600 5.0kb downstream 5.0kb downstream 7508 true Chr05: 18228156-18235663 Eucalyptus grandis
Eucgr.E01600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 18230664-18235663 Eucalyptus grandis
Eucgr.E01600 10.0kb upstream 10.0kb upstream 12508 true Chr05: 18218156-18230663 Eucalyptus grandis
Eucgr.E01600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 18218156-18228155 Eucalyptus grandis
Eucgr.E01600 10.0kb downstream 10.0kb downstream 12508 true Chr05: 18228156-18240663 Eucalyptus grandis
Eucgr.E01600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 18230664-18240663 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061003 5270 Rosid View MSA
123751132 5271 Pentapetalae View MSA
122790055 5272 Eudicot View MSA
122042410 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309962 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.5772 0.0 145.236 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 53.6907 0.0 144.838 High  
cufflinks 8.33079 0.0 25.0507    
cufflinks 31.231 0.0 70.8173    
cufflinks 5.26026 0.0 16.113   Low

0 Strain