Gene : Eucgr.E01507 E. grandis v2.0
Defline:  (1 of 1) PTHR16056:SF2 - TESTIS-EXPRESSED SEQUENCE 10 PROTEIN HOMOLOG Genomic Order:  1183
Name:  ? Eucgr.E01507 Secondary Identifier:  ? PAC:32031576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01507 0.5kb upstream 0.5kb upstream 11837 true Chr05: 16555694-16567530 Eucalyptus grandis
Eucgr.E01507 0.5kb upstream 0.5kb upstream 500 false Chr05: 16567031-16567530 Eucalyptus grandis
Eucgr.E01507 0.5kb downstream 0.5kb downstream 11837 true Chr05: 16555194-16567030 Eucalyptus grandis
Eucgr.E01507 0.5kb downstream 0.5kb downstream 500 false Chr05: 16555194-16555693 Eucalyptus grandis
Eucgr.E01507 1.0kb upstream 1.0kb upstream 12337 true Chr05: 16555694-16568030 Eucalyptus grandis
Eucgr.E01507 1.0kb upstream 1.0kb upstream 1000 false Chr05: 16567031-16568030 Eucalyptus grandis
Eucgr.E01507 1.0kb downstream 1.0kb downstream 12337 true Chr05: 16554694-16567030 Eucalyptus grandis
Eucgr.E01507 1.0kb downstream 1.0kb downstream 1000 false Chr05: 16554694-16555693 Eucalyptus grandis
Eucgr.E01507 2.0kb upstream 2.0kb upstream 13337 true Chr05: 16555694-16569030 Eucalyptus grandis
Eucgr.E01507 2.0kb upstream 2.0kb upstream 2000 false Chr05: 16567031-16569030 Eucalyptus grandis
Eucgr.E01507 2.0kb downstream 2.0kb downstream 13337 true Chr05: 16553694-16567030 Eucalyptus grandis
Eucgr.E01507 2.0kb downstream 2.0kb downstream 2000 false Chr05: 16553694-16555693 Eucalyptus grandis
Eucgr.E01507 5.0kb upstream 5.0kb upstream 16337 true Chr05: 16555694-16572030 Eucalyptus grandis
Eucgr.E01507 5.0kb upstream 5.0kb upstream 5000 false Chr05: 16567031-16572030 Eucalyptus grandis
Eucgr.E01507 5.0kb downstream 5.0kb downstream 16337 true Chr05: 16550694-16567030 Eucalyptus grandis
Eucgr.E01507 5.0kb downstream 5.0kb downstream 5000 false Chr05: 16550694-16555693 Eucalyptus grandis
Eucgr.E01507 10.0kb upstream 10.0kb upstream 21337 true Chr05: 16555694-16577030 Eucalyptus grandis
Eucgr.E01507 10.0kb upstream 10.0kb upstream 10000 false Chr05: 16567031-16577030 Eucalyptus grandis
Eucgr.E01507 10.0kb downstream 10.0kb downstream 21337 true Chr05: 16545694-16567030 Eucalyptus grandis
Eucgr.E01507 10.0kb downstream 10.0kb downstream 10000 false Chr05: 16545694-16555693 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
124068256 5270 Rosid View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.14639 0.0 14.1803    
cufflinks 2.2878 0.0 5.91195   Low
cufflinks 5.7887 0.0 13.3798    
cufflinks 2.8012 0.0 7.05668    
cufflinks 2.59148 0.0 6.55278    
cufflinks 6.77422 0.0 15.5676   High

0 Strain