Gene : Eucgr.E01469 E. grandis v2.0
Defline:  (1 of 6) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  1152
Name:  ? Eucgr.E01469 Secondary Identifier:  ? PAC:32028727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01469 0.5kb upstream 0.5kb upstream 2619 true Chr05: 15970552-15973170 Eucalyptus grandis
Eucgr.E01469 0.5kb upstream 0.5kb upstream 500 false Chr05: 15970552-15971051 Eucalyptus grandis
Eucgr.E01469 0.5kb downstream 0.5kb downstream 2619 true Chr05: 15971052-15973670 Eucalyptus grandis
Eucgr.E01469 0.5kb downstream 0.5kb downstream 500 false Chr05: 15973171-15973670 Eucalyptus grandis
Eucgr.E01469 1.0kb upstream 1.0kb upstream 3119 true Chr05: 15970052-15973170 Eucalyptus grandis
Eucgr.E01469 1.0kb upstream 1.0kb upstream 1000 false Chr05: 15970052-15971051 Eucalyptus grandis
Eucgr.E01469 1.0kb downstream 1.0kb downstream 3119 true Chr05: 15971052-15974170 Eucalyptus grandis
Eucgr.E01469 1.0kb downstream 1.0kb downstream 1000 false Chr05: 15973171-15974170 Eucalyptus grandis
Eucgr.E01469 2.0kb upstream 2.0kb upstream 4119 true Chr05: 15969052-15973170 Eucalyptus grandis
Eucgr.E01469 2.0kb upstream 2.0kb upstream 2000 false Chr05: 15969052-15971051 Eucalyptus grandis
Eucgr.E01469 2.0kb downstream 2.0kb downstream 4119 true Chr05: 15971052-15975170 Eucalyptus grandis
Eucgr.E01469 2.0kb downstream 2.0kb downstream 2000 false Chr05: 15973171-15975170 Eucalyptus grandis
Eucgr.E01469 5.0kb upstream 5.0kb upstream 7119 true Chr05: 15966052-15973170 Eucalyptus grandis
Eucgr.E01469 5.0kb upstream 5.0kb upstream 5000 false Chr05: 15966052-15971051 Eucalyptus grandis
Eucgr.E01469 5.0kb downstream 5.0kb downstream 7119 true Chr05: 15971052-15978170 Eucalyptus grandis
Eucgr.E01469 5.0kb downstream 5.0kb downstream 5000 false Chr05: 15973171-15978170 Eucalyptus grandis
Eucgr.E01469 10.0kb upstream 10.0kb upstream 12119 true Chr05: 15961052-15973170 Eucalyptus grandis
Eucgr.E01469 10.0kb upstream 10.0kb upstream 10000 false Chr05: 15961052-15971051 Eucalyptus grandis
Eucgr.E01469 10.0kb downstream 10.0kb downstream 12119 true Chr05: 15971052-15983170 Eucalyptus grandis
Eucgr.E01469 10.0kb downstream 10.0kb downstream 10000 false Chr05: 15973171-15983170 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062483 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0373 0.0 41.1359    
cufflinks 10.7588 0.0 25.6805   Low
cufflinks 21.9232 0.0 49.409    
cufflinks 25.8447 0.0 57.7983    
cufflinks 20.4946 0.0 46.4047    
cufflinks 24.9929 0.0 55.9927    

0 Strain