Gene : Eucgr.E01432 E. grandis v2.0
Defline:  (1 of 14) PTHR10366:SF425 - BRASSINOSTEROID METABOLIC PATHWAY PROTEIN BEN1 Genomic Order:  1127
Name:  ? Eucgr.E01432 Secondary Identifier:  ? PAC:32031029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01432 0.5kb upstream 0.5kb upstream 3203 true Chr05: 15238887-15242089 Eucalyptus grandis
Eucgr.E01432 0.5kb upstream 0.5kb upstream 500 false Chr05: 15241590-15242089 Eucalyptus grandis
Eucgr.E01432 0.5kb downstream 0.5kb downstream 3203 true Chr05: 15238387-15241589 Eucalyptus grandis
Eucgr.E01432 0.5kb downstream 0.5kb downstream 500 false Chr05: 15238387-15238886 Eucalyptus grandis
Eucgr.E01432 1.0kb upstream 1.0kb upstream 3703 true Chr05: 15238887-15242589 Eucalyptus grandis
Eucgr.E01432 1.0kb upstream 1.0kb upstream 1000 false Chr05: 15241590-15242589 Eucalyptus grandis
Eucgr.E01432 1.0kb downstream 1.0kb downstream 3703 true Chr05: 15237887-15241589 Eucalyptus grandis
Eucgr.E01432 1.0kb downstream 1.0kb downstream 1000 false Chr05: 15237887-15238886 Eucalyptus grandis
Eucgr.E01432 2.0kb upstream 2.0kb upstream 4703 true Chr05: 15238887-15243589 Eucalyptus grandis
Eucgr.E01432 2.0kb upstream 2.0kb upstream 2000 false Chr05: 15241590-15243589 Eucalyptus grandis
Eucgr.E01432 2.0kb downstream 2.0kb downstream 4703 true Chr05: 15236887-15241589 Eucalyptus grandis
Eucgr.E01432 2.0kb downstream 2.0kb downstream 2000 false Chr05: 15236887-15238886 Eucalyptus grandis
Eucgr.E01432 5.0kb upstream 5.0kb upstream 7703 true Chr05: 15238887-15246589 Eucalyptus grandis
Eucgr.E01432 5.0kb upstream 5.0kb upstream 5000 false Chr05: 15241590-15246589 Eucalyptus grandis
Eucgr.E01432 5.0kb downstream 5.0kb downstream 7703 true Chr05: 15233887-15241589 Eucalyptus grandis
Eucgr.E01432 5.0kb downstream 5.0kb downstream 5000 false Chr05: 15233887-15238886 Eucalyptus grandis
Eucgr.E01432 10.0kb upstream 10.0kb upstream 12703 true Chr05: 15238887-15251589 Eucalyptus grandis
Eucgr.E01432 10.0kb upstream 10.0kb upstream 10000 false Chr05: 15241590-15251589 Eucalyptus grandis
Eucgr.E01432 10.0kb downstream 10.0kb downstream 12703 true Chr05: 15228887-15241589 Eucalyptus grandis
Eucgr.E01432 10.0kb downstream 10.0kb downstream 10000 false Chr05: 15228887-15238886 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.86858 0.0 9.7882   Low
cufflinks 12.7491 0.0 28.9667   High
cufflinks 4.37322 0.0 10.9403    
cufflinks 7.77853 0.0 18.3768    
cufflinks 4.82482 0.0 11.9182    
cufflinks 12.4805 0.0 28.363   High

0 Strain