Gene : Eucgr.E01415 E. grandis v2.0
Defline:  (1 of 1) PTHR31529:SF7 - LOB DOMAIN-CONTAINING PROTEIN 19-RELATED Genomic Order:  1112
Name:  ? Eucgr.E01415 Secondary Identifier:  ? PAC:32030913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01415 0.5kb upstream 0.5kb upstream 4240 true Chr05: 14960997-14965236 Eucalyptus grandis
Eucgr.E01415 0.5kb upstream 0.5kb upstream 500 false Chr05: 14960997-14961496 Eucalyptus grandis
Eucgr.E01415 0.5kb downstream 0.5kb downstream 4240 true Chr05: 14961497-14965736 Eucalyptus grandis
Eucgr.E01415 0.5kb downstream 0.5kb downstream 500 false Chr05: 14965237-14965736 Eucalyptus grandis
Eucgr.E01415 1.0kb upstream 1.0kb upstream 4740 true Chr05: 14960497-14965236 Eucalyptus grandis
Eucgr.E01415 1.0kb upstream 1.0kb upstream 1000 false Chr05: 14960497-14961496 Eucalyptus grandis
Eucgr.E01415 1.0kb downstream 1.0kb downstream 4740 true Chr05: 14961497-14966236 Eucalyptus grandis
Eucgr.E01415 1.0kb downstream 1.0kb downstream 1000 false Chr05: 14965237-14966236 Eucalyptus grandis
Eucgr.E01415 2.0kb upstream 2.0kb upstream 5740 true Chr05: 14959497-14965236 Eucalyptus grandis
Eucgr.E01415 2.0kb upstream 2.0kb upstream 2000 false Chr05: 14959497-14961496 Eucalyptus grandis
Eucgr.E01415 2.0kb downstream 2.0kb downstream 5740 true Chr05: 14961497-14967236 Eucalyptus grandis
Eucgr.E01415 2.0kb downstream 2.0kb downstream 2000 false Chr05: 14965237-14967236 Eucalyptus grandis
Eucgr.E01415 5.0kb upstream 5.0kb upstream 8740 true Chr05: 14956497-14965236 Eucalyptus grandis
Eucgr.E01415 5.0kb upstream 5.0kb upstream 5000 false Chr05: 14956497-14961496 Eucalyptus grandis
Eucgr.E01415 5.0kb downstream 5.0kb downstream 8740 true Chr05: 14961497-14970236 Eucalyptus grandis
Eucgr.E01415 5.0kb downstream 5.0kb downstream 5000 false Chr05: 14965237-14970236 Eucalyptus grandis
Eucgr.E01415 10.0kb upstream 10.0kb upstream 13740 true Chr05: 14951497-14965236 Eucalyptus grandis
Eucgr.E01415 10.0kb upstream 10.0kb upstream 10000 false Chr05: 14951497-14961496 Eucalyptus grandis
Eucgr.E01415 10.0kb downstream 10.0kb downstream 13740 true Chr05: 14961497-14975236 Eucalyptus grandis
Eucgr.E01415 10.0kb downstream 10.0kb downstream 10000 false Chr05: 14965237-14975236 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061672 5270 Rosid View MSA
123743730 5271 Pentapetalae View MSA
122791907 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.91544 0.0 17.7683   High
cufflinks 0.59277 0.0 2.0247   Low
cufflinks 2.61526 0.0 7.46731    
cufflinks 1.22306 0.0 3.783    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain