Gene : Eucgr.E02682 E. grandis v2.0
Defline:  (1 of 8) PTHR31828:SF1 - PHOSPHOLIPASE A1-IIALPHA-RELATED Genomic Order:  2257
Name:  ? Eucgr.E02682 Secondary Identifier:  ? PAC:32031112
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPASYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-6803 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02682 0.5kb upstream 0.5kb upstream 1881 true Chr05: 50147962-50149842 Eucalyptus grandis
Eucgr.E02682 0.5kb upstream 0.5kb upstream 500 false Chr05: 50147962-50148461 Eucalyptus grandis
Eucgr.E02682 0.5kb downstream 0.5kb downstream 1881 true Chr05: 50148462-50150342 Eucalyptus grandis
Eucgr.E02682 0.5kb downstream 0.5kb downstream 500 false Chr05: 50149843-50150342 Eucalyptus grandis
Eucgr.E02682 1.0kb upstream 1.0kb upstream 2381 true Chr05: 50147462-50149842 Eucalyptus grandis
Eucgr.E02682 1.0kb upstream 1.0kb upstream 1000 false Chr05: 50147462-50148461 Eucalyptus grandis
Eucgr.E02682 1.0kb downstream 1.0kb downstream 2381 true Chr05: 50148462-50150842 Eucalyptus grandis
Eucgr.E02682 1.0kb downstream 1.0kb downstream 1000 false Chr05: 50149843-50150842 Eucalyptus grandis
Eucgr.E02682 2.0kb upstream 2.0kb upstream 3381 true Chr05: 50146462-50149842 Eucalyptus grandis
Eucgr.E02682 2.0kb upstream 2.0kb upstream 2000 false Chr05: 50146462-50148461 Eucalyptus grandis
Eucgr.E02682 2.0kb downstream 2.0kb downstream 3381 true Chr05: 50148462-50151842 Eucalyptus grandis
Eucgr.E02682 2.0kb downstream 2.0kb downstream 2000 false Chr05: 50149843-50151842 Eucalyptus grandis
Eucgr.E02682 5.0kb upstream 5.0kb upstream 6381 true Chr05: 50143462-50149842 Eucalyptus grandis
Eucgr.E02682 5.0kb upstream 5.0kb upstream 5000 false Chr05: 50143462-50148461 Eucalyptus grandis
Eucgr.E02682 5.0kb downstream 5.0kb downstream 6381 true Chr05: 50148462-50154842 Eucalyptus grandis
Eucgr.E02682 5.0kb downstream 5.0kb downstream 5000 false Chr05: 50149843-50154842 Eucalyptus grandis
Eucgr.E02682 10.0kb upstream 10.0kb upstream 11381 true Chr05: 50138462-50149842 Eucalyptus grandis
Eucgr.E02682 10.0kb upstream 10.0kb upstream 10000 false Chr05: 50138462-50148461 Eucalyptus grandis
Eucgr.E02682 10.0kb downstream 10.0kb downstream 11381 true Chr05: 50148462-50159842 Eucalyptus grandis
Eucgr.E02682 10.0kb downstream 10.0kb downstream 10000 false Chr05: 50149843-50159842 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783948 5273 Angiosperm View MSA
124052298 5270 Rosid View MSA
123755753 5271 Pentapetalae View MSA
122776977 5272 Eudicot View MSA
121351804 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.34091 0.0 13.4959    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.2934 0.0 24.4951    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.04222 0.0 3.10275   Low

0 Strain