Gene : Eucgr.E02606 E. grandis v2.0
Defline:  (1 of 3) PTHR33288:SF3 - APOCYTOCHROME F Genomic Order:  1961
Name:  ? Eucgr.E02606 Secondary Identifier:  ? PAC:32030700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02606 0.5kb upstream 0.5kb upstream 1572 true Chr05: 40465832-40467403 Eucalyptus grandis
Eucgr.E02606 0.5kb upstream 0.5kb upstream 500 false Chr05: 40466904-40467403 Eucalyptus grandis
Eucgr.E02606 0.5kb downstream 0.5kb downstream 1572 true Chr05: 40465332-40466903 Eucalyptus grandis
Eucgr.E02606 0.5kb downstream 0.5kb downstream 500 false Chr05: 40465332-40465831 Eucalyptus grandis
Eucgr.E02606 1.0kb upstream 1.0kb upstream 2072 true Chr05: 40465832-40467903 Eucalyptus grandis
Eucgr.E02606 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40466904-40467903 Eucalyptus grandis
Eucgr.E02606 1.0kb downstream 1.0kb downstream 2072 true Chr05: 40464832-40466903 Eucalyptus grandis
Eucgr.E02606 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40464832-40465831 Eucalyptus grandis
Eucgr.E02606 2.0kb upstream 2.0kb upstream 3072 true Chr05: 40465832-40468903 Eucalyptus grandis
Eucgr.E02606 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40466904-40468903 Eucalyptus grandis
Eucgr.E02606 2.0kb downstream 2.0kb downstream 3072 true Chr05: 40463832-40466903 Eucalyptus grandis
Eucgr.E02606 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40463832-40465831 Eucalyptus grandis
Eucgr.E02606 5.0kb upstream 5.0kb upstream 6072 true Chr05: 40465832-40471903 Eucalyptus grandis
Eucgr.E02606 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40466904-40471903 Eucalyptus grandis
Eucgr.E02606 5.0kb downstream 5.0kb downstream 6072 true Chr05: 40460832-40466903 Eucalyptus grandis
Eucgr.E02606 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40460832-40465831 Eucalyptus grandis
Eucgr.E02606 10.0kb upstream 10.0kb upstream 11072 true Chr05: 40465832-40476903 Eucalyptus grandis
Eucgr.E02606 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40466904-40476903 Eucalyptus grandis
Eucgr.E02606 10.0kb downstream 10.0kb downstream 11072 true Chr05: 40455832-40466903 Eucalyptus grandis
Eucgr.E02606 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40455832-40465831 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050483 5270 Rosid View MSA
123752202 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.54405 0.0 9.5223    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.17028 0.0 6.07834    
cufflinks 0.762348 0.0 2.3865   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.70067 0.0 9.96995    

0 Strain