Gene : Eucgr.E02473 E. grandis v2.0
Defline:  (1 of 1) PTHR24351:SF60 - PROTEIN KINASE PINOID Genomic Order:  1743
Name:  ? Eucgr.E02473 Secondary Identifier:  ? PAC:32028436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02473 0.5kb upstream 0.5kb upstream 2847 true Chr05: 33149450-33152296 Eucalyptus grandis
Eucgr.E02473 0.5kb upstream 0.5kb upstream 500 false Chr05: 33149450-33149949 Eucalyptus grandis
Eucgr.E02473 0.5kb downstream 0.5kb downstream 2847 true Chr05: 33149950-33152796 Eucalyptus grandis
Eucgr.E02473 0.5kb downstream 0.5kb downstream 500 false Chr05: 33152297-33152796 Eucalyptus grandis
Eucgr.E02473 1.0kb upstream 1.0kb upstream 3347 true Chr05: 33148950-33152296 Eucalyptus grandis
Eucgr.E02473 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33148950-33149949 Eucalyptus grandis
Eucgr.E02473 1.0kb downstream 1.0kb downstream 3347 true Chr05: 33149950-33153296 Eucalyptus grandis
Eucgr.E02473 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33152297-33153296 Eucalyptus grandis
Eucgr.E02473 2.0kb upstream 2.0kb upstream 4347 true Chr05: 33147950-33152296 Eucalyptus grandis
Eucgr.E02473 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33147950-33149949 Eucalyptus grandis
Eucgr.E02473 2.0kb downstream 2.0kb downstream 4347 true Chr05: 33149950-33154296 Eucalyptus grandis
Eucgr.E02473 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33152297-33154296 Eucalyptus grandis
Eucgr.E02473 5.0kb upstream 5.0kb upstream 7347 true Chr05: 33144950-33152296 Eucalyptus grandis
Eucgr.E02473 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33144950-33149949 Eucalyptus grandis
Eucgr.E02473 5.0kb downstream 5.0kb downstream 7347 true Chr05: 33149950-33157296 Eucalyptus grandis
Eucgr.E02473 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33152297-33157296 Eucalyptus grandis
Eucgr.E02473 10.0kb upstream 10.0kb upstream 12347 true Chr05: 33139950-33152296 Eucalyptus grandis
Eucgr.E02473 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33139950-33149949 Eucalyptus grandis
Eucgr.E02473 10.0kb downstream 10.0kb downstream 12347 true Chr05: 33149950-33162296 Eucalyptus grandis
Eucgr.E02473 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33152297-33162296 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067652 5270 Rosid View MSA
123738624 5271 Pentapetalae View MSA
122769929 5272 Eudicot View MSA
122046233 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310576 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.796 0.0 33.8012    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.7462 0.0 36.269    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.455778 0.0 1.46581 Low Low

0 Strain