Gene : Eucgr.E02422 E. grandis v2.0
Defline:  (1 of 1) PTHR22939:SF76 - PROTEASE DO-LIKE 5, CHLOROPLASTIC Genomic Order:  1787
Name:  ? Eucgr.E02422 Secondary Identifier:  ? PAC:32028847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02422 0.5kb upstream 0.5kb upstream 4441 true Chr05: 34223692-34228132 Eucalyptus grandis
Eucgr.E02422 0.5kb upstream 0.5kb upstream 500 false Chr05: 34227633-34228132 Eucalyptus grandis
Eucgr.E02422 0.5kb downstream 0.5kb downstream 4441 true Chr05: 34223192-34227632 Eucalyptus grandis
Eucgr.E02422 0.5kb downstream 0.5kb downstream 500 false Chr05: 34223192-34223691 Eucalyptus grandis
Eucgr.E02422 1.0kb upstream 1.0kb upstream 4941 true Chr05: 34223692-34228632 Eucalyptus grandis
Eucgr.E02422 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34227633-34228632 Eucalyptus grandis
Eucgr.E02422 1.0kb downstream 1.0kb downstream 4941 true Chr05: 34222692-34227632 Eucalyptus grandis
Eucgr.E02422 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34222692-34223691 Eucalyptus grandis
Eucgr.E02422 2.0kb upstream 2.0kb upstream 5941 true Chr05: 34223692-34229632 Eucalyptus grandis
Eucgr.E02422 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34227633-34229632 Eucalyptus grandis
Eucgr.E02422 2.0kb downstream 2.0kb downstream 5941 true Chr05: 34221692-34227632 Eucalyptus grandis
Eucgr.E02422 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34221692-34223691 Eucalyptus grandis
Eucgr.E02422 5.0kb upstream 5.0kb upstream 8941 true Chr05: 34223692-34232632 Eucalyptus grandis
Eucgr.E02422 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34227633-34232632 Eucalyptus grandis
Eucgr.E02422 5.0kb downstream 5.0kb downstream 8941 true Chr05: 34218692-34227632 Eucalyptus grandis
Eucgr.E02422 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34218692-34223691 Eucalyptus grandis
Eucgr.E02422 10.0kb upstream 10.0kb upstream 13941 true Chr05: 34223692-34237632 Eucalyptus grandis
Eucgr.E02422 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34227633-34237632 Eucalyptus grandis
Eucgr.E02422 10.0kb downstream 10.0kb downstream 13941 true Chr05: 34213692-34227632 Eucalyptus grandis
Eucgr.E02422 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34213692-34223691 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050488 5270 Rosid View MSA
123749873 5271 Pentapetalae View MSA
122788077 5272 Eudicot View MSA
122044835 5273 Angiosperm View MSA
121347205 5274 Embryophyte View MSA
123425899 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13933 0.0 0.590263 Low Low
cufflinks 4.60014 0.0 11.9022    
cufflinks 0.924045 0.0 3.13005    
cufflinks 1.57718 0.0 4.7881    
cufflinks 0.646469 0.0 2.31042 Low  
cufflinks 12.9198 0.0 29.7731   High

0 Strain