Gene : Eucgr.E02381 E. grandis v2.0
Defline:  (1 of 5) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  1819
Name:  ? Eucgr.E02381 Secondary Identifier:  ? PAC:32029924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02381 0.5kb upstream 0.5kb upstream 1558 true Chr05: 34851719-34853276 Eucalyptus grandis
Eucgr.E02381 0.5kb upstream 0.5kb upstream 500 false Chr05: 34852777-34853276 Eucalyptus grandis
Eucgr.E02381 0.5kb downstream 0.5kb downstream 1558 true Chr05: 34851219-34852776 Eucalyptus grandis
Eucgr.E02381 0.5kb downstream 0.5kb downstream 500 false Chr05: 34851219-34851718 Eucalyptus grandis
Eucgr.E02381 1.0kb upstream 1.0kb upstream 2058 true Chr05: 34851719-34853776 Eucalyptus grandis
Eucgr.E02381 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34852777-34853776 Eucalyptus grandis
Eucgr.E02381 1.0kb downstream 1.0kb downstream 2058 true Chr05: 34850719-34852776 Eucalyptus grandis
Eucgr.E02381 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34850719-34851718 Eucalyptus grandis
Eucgr.E02381 2.0kb upstream 2.0kb upstream 3058 true Chr05: 34851719-34854776 Eucalyptus grandis
Eucgr.E02381 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34852777-34854776 Eucalyptus grandis
Eucgr.E02381 2.0kb downstream 2.0kb downstream 3058 true Chr05: 34849719-34852776 Eucalyptus grandis
Eucgr.E02381 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34849719-34851718 Eucalyptus grandis
Eucgr.E02381 5.0kb upstream 5.0kb upstream 6058 true Chr05: 34851719-34857776 Eucalyptus grandis
Eucgr.E02381 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34852777-34857776 Eucalyptus grandis
Eucgr.E02381 5.0kb downstream 5.0kb downstream 6058 true Chr05: 34846719-34852776 Eucalyptus grandis
Eucgr.E02381 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34846719-34851718 Eucalyptus grandis
Eucgr.E02381 10.0kb upstream 10.0kb upstream 11058 true Chr05: 34851719-34862776 Eucalyptus grandis
Eucgr.E02381 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34852777-34862776 Eucalyptus grandis
Eucgr.E02381 10.0kb downstream 10.0kb downstream 11058 true Chr05: 34841719-34852776 Eucalyptus grandis
Eucgr.E02381 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34841719-34851718 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052356 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 714.348 0.0 1869.59 High  
cufflinks 8.68206 0.0 22.0436    
cufflinks 301.886 0.0 707.065 High  
cufflinks 0.666524 0.0 2.28867   Low
cufflinks 3.30825 0.0 9.24114    
cufflinks 1425.83 0.0 4326.19 High High

0 Strain