Gene : Eucgr.E02408 E. grandis v2.0
Defline:  (1 of 6) PF02492 - CobW/HypB/UreG, nucleotide-binding domain (cobW) Genomic Order:  1799
Name:  ? Eucgr.E02408 Secondary Identifier:  ? PAC:32029251
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02408 0.5kb upstream 0.5kb upstream 6100 true Chr05: 34567094-34573193 Eucalyptus grandis
Eucgr.E02408 0.5kb upstream 0.5kb upstream 500 false Chr05: 34572694-34573193 Eucalyptus grandis
Eucgr.E02408 0.5kb downstream 0.5kb downstream 6100 true Chr05: 34566594-34572693 Eucalyptus grandis
Eucgr.E02408 0.5kb downstream 0.5kb downstream 500 false Chr05: 34566594-34567093 Eucalyptus grandis
Eucgr.E02408 1.0kb upstream 1.0kb upstream 6600 true Chr05: 34567094-34573693 Eucalyptus grandis
Eucgr.E02408 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34572694-34573693 Eucalyptus grandis
Eucgr.E02408 1.0kb downstream 1.0kb downstream 6600 true Chr05: 34566094-34572693 Eucalyptus grandis
Eucgr.E02408 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34566094-34567093 Eucalyptus grandis
Eucgr.E02408 2.0kb upstream 2.0kb upstream 7600 true Chr05: 34567094-34574693 Eucalyptus grandis
Eucgr.E02408 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34572694-34574693 Eucalyptus grandis
Eucgr.E02408 2.0kb downstream 2.0kb downstream 7600 true Chr05: 34565094-34572693 Eucalyptus grandis
Eucgr.E02408 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34565094-34567093 Eucalyptus grandis
Eucgr.E02408 5.0kb upstream 5.0kb upstream 10600 true Chr05: 34567094-34577693 Eucalyptus grandis
Eucgr.E02408 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34572694-34577693 Eucalyptus grandis
Eucgr.E02408 5.0kb downstream 5.0kb downstream 10600 true Chr05: 34562094-34572693 Eucalyptus grandis
Eucgr.E02408 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34562094-34567093 Eucalyptus grandis
Eucgr.E02408 10.0kb upstream 10.0kb upstream 15600 true Chr05: 34567094-34582693 Eucalyptus grandis
Eucgr.E02408 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34572694-34582693 Eucalyptus grandis
Eucgr.E02408 10.0kb downstream 10.0kb downstream 15600 true Chr05: 34557094-34572693 Eucalyptus grandis
Eucgr.E02408 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34557094-34567093 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066303 5270 Rosid View MSA
123739573 5271 Pentapetalae View MSA
122789568 5272 Eudicot View MSA
122042547 5273 Angiosperm View MSA
121348820 5274 Embryophyte View MSA
123425369 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4092 0.0 43.7546   High
cufflinks 19.3014 0.0 43.4984   High
cufflinks 16.4684 0.0 37.5428    
cufflinks 11.826 0.0 27.5846   Low
cufflinks 12.6493 0.0 29.335    
cufflinks 15.1194 0.0 34.6862    

0 Strain