Gene : Eucgr.E02359 E. grandis v2.0
Defline:  (1 of 2) PTHR32227:SF127 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  1839
Name:  ? Eucgr.E02359 Secondary Identifier:  ? PAC:32030602
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02359 0.5kb upstream 0.5kb upstream 2237 true Chr05: 35277270-35279506 Eucalyptus grandis
Eucgr.E02359 0.5kb upstream 0.5kb upstream 500 false Chr05: 35277270-35277769 Eucalyptus grandis
Eucgr.E02359 0.5kb downstream 0.5kb downstream 2237 true Chr05: 35277770-35280006 Eucalyptus grandis
Eucgr.E02359 0.5kb downstream 0.5kb downstream 500 false Chr05: 35279507-35280006 Eucalyptus grandis
Eucgr.E02359 1.0kb upstream 1.0kb upstream 2737 true Chr05: 35276770-35279506 Eucalyptus grandis
Eucgr.E02359 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35276770-35277769 Eucalyptus grandis
Eucgr.E02359 1.0kb downstream 1.0kb downstream 2737 true Chr05: 35277770-35280506 Eucalyptus grandis
Eucgr.E02359 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35279507-35280506 Eucalyptus grandis
Eucgr.E02359 2.0kb upstream 2.0kb upstream 3737 true Chr05: 35275770-35279506 Eucalyptus grandis
Eucgr.E02359 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35275770-35277769 Eucalyptus grandis
Eucgr.E02359 2.0kb downstream 2.0kb downstream 3737 true Chr05: 35277770-35281506 Eucalyptus grandis
Eucgr.E02359 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35279507-35281506 Eucalyptus grandis
Eucgr.E02359 5.0kb upstream 5.0kb upstream 6737 true Chr05: 35272770-35279506 Eucalyptus grandis
Eucgr.E02359 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35272770-35277769 Eucalyptus grandis
Eucgr.E02359 5.0kb downstream 5.0kb downstream 6737 true Chr05: 35277770-35284506 Eucalyptus grandis
Eucgr.E02359 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35279507-35284506 Eucalyptus grandis
Eucgr.E02359 10.0kb upstream 10.0kb upstream 11737 true Chr05: 35267770-35279506 Eucalyptus grandis
Eucgr.E02359 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35267770-35277769 Eucalyptus grandis
Eucgr.E02359 10.0kb downstream 10.0kb downstream 11737 true Chr05: 35277770-35289506 Eucalyptus grandis
Eucgr.E02359 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35279507-35289506 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069685 5270 Rosid View MSA
123748729 5271 Pentapetalae View MSA
122795839 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.67221 0.0 4.80511    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.18844 0.0 6.15483    
cufflinks 0.213339 0.0 0.803803 Low Low
cufflinks 13.424 0.0 31.3571   High
cufflinks 4.4571 0.0 11.5947    

0 Strain