Gene : Eucgr.E03366 E. grandis v2.0
Defline:  (1 of 2) PTHR27001:SF91 - PROTEIN STRUBBELIG-RELATED Genomic Order:  2533
Name:  ? Eucgr.E03366 Secondary Identifier:  ? PAC:32031206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03366 0.5kb upstream 0.5kb upstream 8901 true Chr05: 59638279-59647179 Eucalyptus grandis
Eucgr.E03366 0.5kb upstream 0.5kb upstream 500 false Chr05: 59638279-59638778 Eucalyptus grandis
Eucgr.E03366 0.5kb downstream 0.5kb downstream 8901 true Chr05: 59638779-59647679 Eucalyptus grandis
Eucgr.E03366 0.5kb downstream 0.5kb downstream 500 false Chr05: 59647180-59647679 Eucalyptus grandis
Eucgr.E03366 1.0kb upstream 1.0kb upstream 9401 true Chr05: 59637779-59647179 Eucalyptus grandis
Eucgr.E03366 1.0kb upstream 1.0kb upstream 1000 false Chr05: 59637779-59638778 Eucalyptus grandis
Eucgr.E03366 1.0kb downstream 1.0kb downstream 9401 true Chr05: 59638779-59648179 Eucalyptus grandis
Eucgr.E03366 1.0kb downstream 1.0kb downstream 1000 false Chr05: 59647180-59648179 Eucalyptus grandis
Eucgr.E03366 2.0kb upstream 2.0kb upstream 10401 true Chr05: 59636779-59647179 Eucalyptus grandis
Eucgr.E03366 2.0kb upstream 2.0kb upstream 2000 false Chr05: 59636779-59638778 Eucalyptus grandis
Eucgr.E03366 2.0kb downstream 2.0kb downstream 10401 true Chr05: 59638779-59649179 Eucalyptus grandis
Eucgr.E03366 2.0kb downstream 2.0kb downstream 2000 false Chr05: 59647180-59649179 Eucalyptus grandis
Eucgr.E03366 5.0kb upstream 5.0kb upstream 13401 true Chr05: 59633779-59647179 Eucalyptus grandis
Eucgr.E03366 5.0kb upstream 5.0kb upstream 5000 false Chr05: 59633779-59638778 Eucalyptus grandis
Eucgr.E03366 5.0kb downstream 5.0kb downstream 13401 true Chr05: 59638779-59652179 Eucalyptus grandis
Eucgr.E03366 5.0kb downstream 5.0kb downstream 5000 false Chr05: 59647180-59652179 Eucalyptus grandis
Eucgr.E03366 10.0kb upstream 10.0kb upstream 18401 true Chr05: 59628779-59647179 Eucalyptus grandis
Eucgr.E03366 10.0kb upstream 10.0kb upstream 10000 false Chr05: 59628779-59638778 Eucalyptus grandis
Eucgr.E03366 10.0kb downstream 10.0kb downstream 18401 true Chr05: 59638779-59657179 Eucalyptus grandis
Eucgr.E03366 10.0kb downstream 10.0kb downstream 10000 false Chr05: 59647180-59657179 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064785 5270 Rosid View MSA
123746187 5271 Pentapetalae View MSA
122786537 5272 Eudicot View MSA
122051467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5173 0.0 25.5753    
cufflinks 6.58088 0.0 14.9213    
cufflinks 12.5256 0.0 27.7593    
cufflinks 10.0423 0.0 22.3465    
cufflinks 26.7947 0.0 59.7356   High
cufflinks 2.68117 0.0 6.60506   Low

0 Strain