Gene : Eucgr.E03305 E. grandis v2.0
Defline:  (1 of 1) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Genomic Order:  2406
Name:  ? Eucgr.E03305 Secondary Identifier:  ? PAC:32031609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03305 0.5kb upstream 0.5kb upstream 6357 true Chr05: 54450426-54456782 Eucalyptus grandis
Eucgr.E03305 0.5kb upstream 0.5kb upstream 500 false Chr05: 54456283-54456782 Eucalyptus grandis
Eucgr.E03305 0.5kb downstream 0.5kb downstream 6357 true Chr05: 54449926-54456282 Eucalyptus grandis
Eucgr.E03305 0.5kb downstream 0.5kb downstream 500 false Chr05: 54449926-54450425 Eucalyptus grandis
Eucgr.E03305 1.0kb upstream 1.0kb upstream 6857 true Chr05: 54450426-54457282 Eucalyptus grandis
Eucgr.E03305 1.0kb upstream 1.0kb upstream 1000 false Chr05: 54456283-54457282 Eucalyptus grandis
Eucgr.E03305 1.0kb downstream 1.0kb downstream 6857 true Chr05: 54449426-54456282 Eucalyptus grandis
Eucgr.E03305 1.0kb downstream 1.0kb downstream 1000 false Chr05: 54449426-54450425 Eucalyptus grandis
Eucgr.E03305 2.0kb upstream 2.0kb upstream 7857 true Chr05: 54450426-54458282 Eucalyptus grandis
Eucgr.E03305 2.0kb upstream 2.0kb upstream 2000 false Chr05: 54456283-54458282 Eucalyptus grandis
Eucgr.E03305 2.0kb downstream 2.0kb downstream 7857 true Chr05: 54448426-54456282 Eucalyptus grandis
Eucgr.E03305 2.0kb downstream 2.0kb downstream 2000 false Chr05: 54448426-54450425 Eucalyptus grandis
Eucgr.E03305 5.0kb upstream 5.0kb upstream 10857 true Chr05: 54450426-54461282 Eucalyptus grandis
Eucgr.E03305 5.0kb upstream 5.0kb upstream 5000 false Chr05: 54456283-54461282 Eucalyptus grandis
Eucgr.E03305 5.0kb downstream 5.0kb downstream 10857 true Chr05: 54445426-54456282 Eucalyptus grandis
Eucgr.E03305 5.0kb downstream 5.0kb downstream 5000 false Chr05: 54445426-54450425 Eucalyptus grandis
Eucgr.E03305 10.0kb upstream 10.0kb upstream 15857 true Chr05: 54450426-54466282 Eucalyptus grandis
Eucgr.E03305 10.0kb upstream 10.0kb upstream 10000 false Chr05: 54456283-54466282 Eucalyptus grandis
Eucgr.E03305 10.0kb downstream 10.0kb downstream 15857 true Chr05: 54440426-54456282 Eucalyptus grandis
Eucgr.E03305 10.0kb downstream 10.0kb downstream 10000 false Chr05: 54440426-54450425 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.79757 0.0 15.8232    
cufflinks 11.2437 0.0 26.0195    
cufflinks 6.59327 0.0 15.3253    
cufflinks 14.4188 0.0 32.4852   High
cufflinks 8.61942 0.0 20.6331    
cufflinks 5.70123 0.0 13.5066   Low

0 Strain