Gene : Eucgr.E03265 E. grandis v2.0
Defline:  (1 of 1) PTHR15696:SF3 - PROTEIN SMG7L Genomic Order:  2375
Name:  ? Eucgr.E03265 Secondary Identifier:  ? PAC:32031218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03265 0.5kb upstream 0.5kb upstream 5333 true Chr05: 53791240-53796572 Eucalyptus grandis
Eucgr.E03265 0.5kb upstream 0.5kb upstream 500 false Chr05: 53796073-53796572 Eucalyptus grandis
Eucgr.E03265 0.5kb downstream 0.5kb downstream 5333 true Chr05: 53790740-53796072 Eucalyptus grandis
Eucgr.E03265 0.5kb downstream 0.5kb downstream 500 false Chr05: 53790740-53791239 Eucalyptus grandis
Eucgr.E03265 1.0kb upstream 1.0kb upstream 5833 true Chr05: 53791240-53797072 Eucalyptus grandis
Eucgr.E03265 1.0kb upstream 1.0kb upstream 1000 false Chr05: 53796073-53797072 Eucalyptus grandis
Eucgr.E03265 1.0kb downstream 1.0kb downstream 5833 true Chr05: 53790240-53796072 Eucalyptus grandis
Eucgr.E03265 1.0kb downstream 1.0kb downstream 1000 false Chr05: 53790240-53791239 Eucalyptus grandis
Eucgr.E03265 2.0kb upstream 2.0kb upstream 6833 true Chr05: 53791240-53798072 Eucalyptus grandis
Eucgr.E03265 2.0kb upstream 2.0kb upstream 2000 false Chr05: 53796073-53798072 Eucalyptus grandis
Eucgr.E03265 2.0kb downstream 2.0kb downstream 6833 true Chr05: 53789240-53796072 Eucalyptus grandis
Eucgr.E03265 2.0kb downstream 2.0kb downstream 2000 false Chr05: 53789240-53791239 Eucalyptus grandis
Eucgr.E03265 5.0kb upstream 5.0kb upstream 9833 true Chr05: 53791240-53801072 Eucalyptus grandis
Eucgr.E03265 5.0kb upstream 5.0kb upstream 5000 false Chr05: 53796073-53801072 Eucalyptus grandis
Eucgr.E03265 5.0kb downstream 5.0kb downstream 9833 true Chr05: 53786240-53796072 Eucalyptus grandis
Eucgr.E03265 5.0kb downstream 5.0kb downstream 5000 false Chr05: 53786240-53791239 Eucalyptus grandis
Eucgr.E03265 10.0kb upstream 10.0kb upstream 14833 true Chr05: 53791240-53806072 Eucalyptus grandis
Eucgr.E03265 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53796073-53806072 Eucalyptus grandis
Eucgr.E03265 10.0kb downstream 10.0kb downstream 14833 true Chr05: 53781240-53796072 Eucalyptus grandis
Eucgr.E03265 10.0kb downstream 10.0kb downstream 10000 false Chr05: 53781240-53791239 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0052 0.0 22.2519    
cufflinks 4.97431 0.0 11.4049    
cufflinks 10.0613 0.0 22.3536    
cufflinks 4.09985 0.0 9.55264    
cufflinks 3.41587 0.0 8.10365   Low
cufflinks 9.70138 0.0 21.628    

0 Strain