Gene : Eucgr.E03252 E. grandis v2.0
Defline:  (1 of 1) PTHR33199:SF8 - MACPF DOMAIN-CONTAINING PROTEIN NSL1 Genomic Order:  2364
Name:  ? Eucgr.E03252 Secondary Identifier:  ? PAC:32030010
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03252 0.5kb upstream 0.5kb upstream 5889 true Chr05: 53604412-53610300 Eucalyptus grandis
Eucgr.E03252 0.5kb upstream 0.5kb upstream 500 false Chr05: 53609801-53610300 Eucalyptus grandis
Eucgr.E03252 0.5kb downstream 0.5kb downstream 5889 true Chr05: 53603912-53609800 Eucalyptus grandis
Eucgr.E03252 0.5kb downstream 0.5kb downstream 500 false Chr05: 53603912-53604411 Eucalyptus grandis
Eucgr.E03252 1.0kb upstream 1.0kb upstream 6389 true Chr05: 53604412-53610800 Eucalyptus grandis
Eucgr.E03252 1.0kb upstream 1.0kb upstream 1000 false Chr05: 53609801-53610800 Eucalyptus grandis
Eucgr.E03252 1.0kb downstream 1.0kb downstream 6389 true Chr05: 53603412-53609800 Eucalyptus grandis
Eucgr.E03252 1.0kb downstream 1.0kb downstream 1000 false Chr05: 53603412-53604411 Eucalyptus grandis
Eucgr.E03252 2.0kb upstream 2.0kb upstream 7389 true Chr05: 53604412-53611800 Eucalyptus grandis
Eucgr.E03252 2.0kb upstream 2.0kb upstream 2000 false Chr05: 53609801-53611800 Eucalyptus grandis
Eucgr.E03252 2.0kb downstream 2.0kb downstream 7389 true Chr05: 53602412-53609800 Eucalyptus grandis
Eucgr.E03252 2.0kb downstream 2.0kb downstream 2000 false Chr05: 53602412-53604411 Eucalyptus grandis
Eucgr.E03252 5.0kb upstream 5.0kb upstream 10389 true Chr05: 53604412-53614800 Eucalyptus grandis
Eucgr.E03252 5.0kb upstream 5.0kb upstream 5000 false Chr05: 53609801-53614800 Eucalyptus grandis
Eucgr.E03252 5.0kb downstream 5.0kb downstream 10389 true Chr05: 53599412-53609800 Eucalyptus grandis
Eucgr.E03252 5.0kb downstream 5.0kb downstream 5000 false Chr05: 53599412-53604411 Eucalyptus grandis
Eucgr.E03252 10.0kb upstream 10.0kb upstream 15389 true Chr05: 53604412-53619800 Eucalyptus grandis
Eucgr.E03252 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53609801-53619800 Eucalyptus grandis
Eucgr.E03252 10.0kb downstream 10.0kb downstream 15389 true Chr05: 53594412-53609800 Eucalyptus grandis
Eucgr.E03252 10.0kb downstream 10.0kb downstream 10000 false Chr05: 53594412-53604411 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3079 0.0 43.2863   Low
cufflinks 38.9552 0.0 91.4675   High
cufflinks 22.4671 0.0 50.9372    
cufflinks 31.7515 0.0 73.1198    
cufflinks 40.0463 0.0 94.56 High High
cufflinks 23.5217 0.0 53.4045    

0 Strain