Gene : Eucgr.E03103 E. grandis v2.0
Defline:  (1 of 6) PTHR23078 - VESICULAR-FUSION PROTEIN NSF Genomic Order:  2453
Name:  ? Eucgr.E03103 Secondary Identifier:  ? PAC:32030976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03103 0.5kb upstream 0.5kb upstream 9017 true Chr05: 56492249-56501265 Eucalyptus grandis
Eucgr.E03103 0.5kb upstream 0.5kb upstream 500 false Chr05: 56492249-56492748 Eucalyptus grandis
Eucgr.E03103 0.5kb downstream 0.5kb downstream 9017 true Chr05: 56492749-56501765 Eucalyptus grandis
Eucgr.E03103 0.5kb downstream 0.5kb downstream 500 false Chr05: 56501266-56501765 Eucalyptus grandis
Eucgr.E03103 1.0kb upstream 1.0kb upstream 9517 true Chr05: 56491749-56501265 Eucalyptus grandis
Eucgr.E03103 1.0kb upstream 1.0kb upstream 1000 false Chr05: 56491749-56492748 Eucalyptus grandis
Eucgr.E03103 1.0kb downstream 1.0kb downstream 9517 true Chr05: 56492749-56502265 Eucalyptus grandis
Eucgr.E03103 1.0kb downstream 1.0kb downstream 1000 false Chr05: 56501266-56502265 Eucalyptus grandis
Eucgr.E03103 2.0kb upstream 2.0kb upstream 10517 true Chr05: 56490749-56501265 Eucalyptus grandis
Eucgr.E03103 2.0kb upstream 2.0kb upstream 2000 false Chr05: 56490749-56492748 Eucalyptus grandis
Eucgr.E03103 2.0kb downstream 2.0kb downstream 10517 true Chr05: 56492749-56503265 Eucalyptus grandis
Eucgr.E03103 2.0kb downstream 2.0kb downstream 2000 false Chr05: 56501266-56503265 Eucalyptus grandis
Eucgr.E03103 5.0kb upstream 5.0kb upstream 13517 true Chr05: 56487749-56501265 Eucalyptus grandis
Eucgr.E03103 5.0kb upstream 5.0kb upstream 5000 false Chr05: 56487749-56492748 Eucalyptus grandis
Eucgr.E03103 5.0kb downstream 5.0kb downstream 13517 true Chr05: 56492749-56506265 Eucalyptus grandis
Eucgr.E03103 5.0kb downstream 5.0kb downstream 5000 false Chr05: 56501266-56506265 Eucalyptus grandis
Eucgr.E03103 10.0kb upstream 10.0kb upstream 18517 true Chr05: 56482749-56501265 Eucalyptus grandis
Eucgr.E03103 10.0kb upstream 10.0kb upstream 10000 false Chr05: 56482749-56492748 Eucalyptus grandis
Eucgr.E03103 10.0kb downstream 10.0kb downstream 18517 true Chr05: 56492749-56511265 Eucalyptus grandis
Eucgr.E03103 10.0kb downstream 10.0kb downstream 10000 false Chr05: 56501266-56511265 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051134 5270 Rosid View MSA
123748878 5271 Pentapetalae View MSA
122787277 5272 Eudicot View MSA
122044573 5273 Angiosperm View MSA
121350302 5274 Embryophyte View MSA
123424602 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38196 0.0 3.9068    
cufflinks 1.96833 0.0 5.31685   High
cufflinks 0.263577 0.0 0.905329 Low  
cufflinks 1.01181 0.0 2.92171    
cufflinks 0.405119 0.0 1.3128 Low  
cufflinks 0.0856207 0.0 0.375465 Low Low

0 Strain