Gene : Eucgr.E02789 E. grandis v2.0
Defline:  (1 of 4) PTHR13609 - UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED Genomic Order:  2180
Name:  ? Eucgr.E02789 Secondary Identifier:  ? PAC:32031220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02789 0.5kb upstream 0.5kb upstream 4851 true Chr05: 48008918-48013768 Eucalyptus grandis
Eucgr.E02789 0.5kb upstream 0.5kb upstream 500 false Chr05: 48013269-48013768 Eucalyptus grandis
Eucgr.E02789 0.5kb downstream 0.5kb downstream 4851 true Chr05: 48008418-48013268 Eucalyptus grandis
Eucgr.E02789 0.5kb downstream 0.5kb downstream 500 false Chr05: 48008418-48008917 Eucalyptus grandis
Eucgr.E02789 1.0kb upstream 1.0kb upstream 5351 true Chr05: 48008918-48014268 Eucalyptus grandis
Eucgr.E02789 1.0kb upstream 1.0kb upstream 1000 false Chr05: 48013269-48014268 Eucalyptus grandis
Eucgr.E02789 1.0kb downstream 1.0kb downstream 5351 true Chr05: 48007918-48013268 Eucalyptus grandis
Eucgr.E02789 1.0kb downstream 1.0kb downstream 1000 false Chr05: 48007918-48008917 Eucalyptus grandis
Eucgr.E02789 2.0kb upstream 2.0kb upstream 6351 true Chr05: 48008918-48015268 Eucalyptus grandis
Eucgr.E02789 2.0kb upstream 2.0kb upstream 2000 false Chr05: 48013269-48015268 Eucalyptus grandis
Eucgr.E02789 2.0kb downstream 2.0kb downstream 6351 true Chr05: 48006918-48013268 Eucalyptus grandis
Eucgr.E02789 2.0kb downstream 2.0kb downstream 2000 false Chr05: 48006918-48008917 Eucalyptus grandis
Eucgr.E02789 5.0kb upstream 5.0kb upstream 9351 true Chr05: 48008918-48018268 Eucalyptus grandis
Eucgr.E02789 5.0kb upstream 5.0kb upstream 5000 false Chr05: 48013269-48018268 Eucalyptus grandis
Eucgr.E02789 5.0kb downstream 5.0kb downstream 9351 true Chr05: 48003918-48013268 Eucalyptus grandis
Eucgr.E02789 5.0kb downstream 5.0kb downstream 5000 false Chr05: 48003918-48008917 Eucalyptus grandis
Eucgr.E02789 10.0kb upstream 10.0kb upstream 14351 true Chr05: 48008918-48023268 Eucalyptus grandis
Eucgr.E02789 10.0kb upstream 10.0kb upstream 10000 false Chr05: 48013269-48023268 Eucalyptus grandis
Eucgr.E02789 10.0kb downstream 10.0kb downstream 14351 true Chr05: 47998918-48013268 Eucalyptus grandis
Eucgr.E02789 10.0kb downstream 10.0kb downstream 10000 false Chr05: 47998918-48008917 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072522 5270 Rosid View MSA
123744132 5271 Pentapetalae View MSA
122790958 5272 Eudicot View MSA
122048669 5273 Angiosperm View MSA
121350639 5274 Embryophyte View MSA
123426786 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.50214 0.0 20.3762    
cufflinks 35.4122 0.0 90.4726    
cufflinks 6.87212 0.0 18.6238   Low
cufflinks 29.631 0.0 69.557    
cufflinks 44.7336 0.0 101.504 High High
cufflinks 8.525 0.0 23.4956    

0 Strain