Gene : Eucgr.E02818 E. grandis v2.0
Defline:  (1 of 53) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2164
Name:  ? Eucgr.E02818 Secondary Identifier:  ? PAC:32031558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E02818 0.5kb upstream 0.5kb upstream 2462 true Chr05: 47476900-47479361 Eucalyptus grandis
Eucgr.E02818 0.5kb upstream 0.5kb upstream 500 false Chr05: 47476900-47477399 Eucalyptus grandis
Eucgr.E02818 0.5kb downstream 0.5kb downstream 2462 true Chr05: 47477400-47479861 Eucalyptus grandis
Eucgr.E02818 0.5kb downstream 0.5kb downstream 500 false Chr05: 47479362-47479861 Eucalyptus grandis
Eucgr.E02818 1.0kb upstream 1.0kb upstream 2962 true Chr05: 47476400-47479361 Eucalyptus grandis
Eucgr.E02818 1.0kb upstream 1.0kb upstream 1000 false Chr05: 47476400-47477399 Eucalyptus grandis
Eucgr.E02818 1.0kb downstream 1.0kb downstream 2962 true Chr05: 47477400-47480361 Eucalyptus grandis
Eucgr.E02818 1.0kb downstream 1.0kb downstream 1000 false Chr05: 47479362-47480361 Eucalyptus grandis
Eucgr.E02818 2.0kb upstream 2.0kb upstream 3962 true Chr05: 47475400-47479361 Eucalyptus grandis
Eucgr.E02818 2.0kb upstream 2.0kb upstream 2000 false Chr05: 47475400-47477399 Eucalyptus grandis
Eucgr.E02818 2.0kb downstream 2.0kb downstream 3962 true Chr05: 47477400-47481361 Eucalyptus grandis
Eucgr.E02818 2.0kb downstream 2.0kb downstream 2000 false Chr05: 47479362-47481361 Eucalyptus grandis
Eucgr.E02818 5.0kb upstream 5.0kb upstream 6962 true Chr05: 47472400-47479361 Eucalyptus grandis
Eucgr.E02818 5.0kb upstream 5.0kb upstream 5000 false Chr05: 47472400-47477399 Eucalyptus grandis
Eucgr.E02818 5.0kb downstream 5.0kb downstream 6962 true Chr05: 47477400-47484361 Eucalyptus grandis
Eucgr.E02818 5.0kb downstream 5.0kb downstream 5000 false Chr05: 47479362-47484361 Eucalyptus grandis
Eucgr.E02818 10.0kb upstream 10.0kb upstream 11962 true Chr05: 47467400-47479361 Eucalyptus grandis
Eucgr.E02818 10.0kb upstream 10.0kb upstream 10000 false Chr05: 47467400-47477399 Eucalyptus grandis
Eucgr.E02818 10.0kb downstream 10.0kb downstream 11962 true Chr05: 47477400-47489361 Eucalyptus grandis
Eucgr.E02818 10.0kb downstream 10.0kb downstream 10000 false Chr05: 47479362-47489361 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050338 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61355 0.0 4.37789   High
cufflinks 0.680443 0.0 2.0136 Low  
cufflinks 0.884266 0.0 2.54609    
cufflinks 0.715379 0.0 2.09893    
cufflinks 0.724827 0.0 2.13827 Low  
cufflinks 0.742776 0.0 2.19608 Low  

0 Strain