Gene : Eucgr.E03950 E. grandis v2.0
Defline:  (1 of 11) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  3050
Name:  ? Eucgr.E03950 Secondary Identifier:  ? PAC:32031690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03950 0.5kb upstream 0.5kb upstream 3851 true Chr05: 71997737-72001587 Eucalyptus grandis
Eucgr.E03950 0.5kb upstream 0.5kb upstream 500 false Chr05: 71997737-71998236 Eucalyptus grandis
Eucgr.E03950 0.5kb downstream 0.5kb downstream 3851 true Chr05: 71998237-72002087 Eucalyptus grandis
Eucgr.E03950 0.5kb downstream 0.5kb downstream 500 false Chr05: 72001588-72002087 Eucalyptus grandis
Eucgr.E03950 1.0kb upstream 1.0kb upstream 4351 true Chr05: 71997237-72001587 Eucalyptus grandis
Eucgr.E03950 1.0kb upstream 1.0kb upstream 1000 false Chr05: 71997237-71998236 Eucalyptus grandis
Eucgr.E03950 1.0kb downstream 1.0kb downstream 4351 true Chr05: 71998237-72002587 Eucalyptus grandis
Eucgr.E03950 1.0kb downstream 1.0kb downstream 1000 false Chr05: 72001588-72002587 Eucalyptus grandis
Eucgr.E03950 2.0kb upstream 2.0kb upstream 5351 true Chr05: 71996237-72001587 Eucalyptus grandis
Eucgr.E03950 2.0kb upstream 2.0kb upstream 2000 false Chr05: 71996237-71998236 Eucalyptus grandis
Eucgr.E03950 2.0kb downstream 2.0kb downstream 5351 true Chr05: 71998237-72003587 Eucalyptus grandis
Eucgr.E03950 2.0kb downstream 2.0kb downstream 2000 false Chr05: 72001588-72003587 Eucalyptus grandis
Eucgr.E03950 5.0kb upstream 5.0kb upstream 8351 true Chr05: 71993237-72001587 Eucalyptus grandis
Eucgr.E03950 5.0kb upstream 5.0kb upstream 5000 false Chr05: 71993237-71998236 Eucalyptus grandis
Eucgr.E03950 5.0kb downstream 5.0kb downstream 8351 true Chr05: 71998237-72006587 Eucalyptus grandis
Eucgr.E03950 5.0kb downstream 5.0kb downstream 5000 false Chr05: 72001588-72006587 Eucalyptus grandis
Eucgr.E03950 10.0kb upstream 10.0kb upstream 13351 true Chr05: 71988237-72001587 Eucalyptus grandis
Eucgr.E03950 10.0kb upstream 10.0kb upstream 10000 false Chr05: 71988237-71998236 Eucalyptus grandis
Eucgr.E03950 10.0kb downstream 10.0kb downstream 13351 true Chr05: 71998237-72011587 Eucalyptus grandis
Eucgr.E03950 10.0kb downstream 10.0kb downstream 10000 false Chr05: 72001588-72011587 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072180 5270 Rosid View MSA
123744738 5271 Pentapetalae View MSA
122794036 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.55911 0.0 15.3414    
cufflinks 11.9457 0.0 26.8061   High
cufflinks 8.315 0.0 19.0588    
cufflinks 11.6055 0.0 26.0284   High
cufflinks 6.38749 0.0 14.9622    
cufflinks 4.17289 0.0 10.1973   Low

0 Strain