Gene : Eucgr.E03960 E. grandis v2.0
Defline:  (1 of 3) PTHR31803:SF10 - UBIQUINOL OXIDASE 4, CHLOROPLASTIC/CHROMOPLASTIC Genomic Order:  3040
Name:  ? Eucgr.E03960 Secondary Identifier:  ? PAC:32031199
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4302 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03960 0.5kb upstream 0.5kb upstream 5352 true Chr05: 71878207-71883558 Eucalyptus grandis
Eucgr.E03960 0.5kb upstream 0.5kb upstream 500 false Chr05: 71883059-71883558 Eucalyptus grandis
Eucgr.E03960 0.5kb downstream 0.5kb downstream 5352 true Chr05: 71877707-71883058 Eucalyptus grandis
Eucgr.E03960 0.5kb downstream 0.5kb downstream 500 false Chr05: 71877707-71878206 Eucalyptus grandis
Eucgr.E03960 1.0kb upstream 1.0kb upstream 5852 true Chr05: 71878207-71884058 Eucalyptus grandis
Eucgr.E03960 1.0kb upstream 1.0kb upstream 1000 false Chr05: 71883059-71884058 Eucalyptus grandis
Eucgr.E03960 1.0kb downstream 1.0kb downstream 5852 true Chr05: 71877207-71883058 Eucalyptus grandis
Eucgr.E03960 1.0kb downstream 1.0kb downstream 1000 false Chr05: 71877207-71878206 Eucalyptus grandis
Eucgr.E03960 2.0kb upstream 2.0kb upstream 6852 true Chr05: 71878207-71885058 Eucalyptus grandis
Eucgr.E03960 2.0kb upstream 2.0kb upstream 2000 false Chr05: 71883059-71885058 Eucalyptus grandis
Eucgr.E03960 2.0kb downstream 2.0kb downstream 6852 true Chr05: 71876207-71883058 Eucalyptus grandis
Eucgr.E03960 2.0kb downstream 2.0kb downstream 2000 false Chr05: 71876207-71878206 Eucalyptus grandis
Eucgr.E03960 5.0kb upstream 5.0kb upstream 9852 true Chr05: 71878207-71888058 Eucalyptus grandis
Eucgr.E03960 5.0kb upstream 5.0kb upstream 5000 false Chr05: 71883059-71888058 Eucalyptus grandis
Eucgr.E03960 5.0kb downstream 5.0kb downstream 9852 true Chr05: 71873207-71883058 Eucalyptus grandis
Eucgr.E03960 5.0kb downstream 5.0kb downstream 5000 false Chr05: 71873207-71878206 Eucalyptus grandis
Eucgr.E03960 10.0kb upstream 10.0kb upstream 14852 true Chr05: 71878207-71893058 Eucalyptus grandis
Eucgr.E03960 10.0kb upstream 10.0kb upstream 10000 false Chr05: 71883059-71893058 Eucalyptus grandis
Eucgr.E03960 10.0kb downstream 10.0kb downstream 14852 true Chr05: 71868207-71883058 Eucalyptus grandis
Eucgr.E03960 10.0kb downstream 10.0kb downstream 10000 false Chr05: 71868207-71878206 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073832 5270 Rosid View MSA
123736785 5271 Pentapetalae View MSA
122786368 5272 Eudicot View MSA
122045919 5273 Angiosperm View MSA
121344765 5274 Embryophyte View MSA
123427941 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1695 0.0 38.6349    
cufflinks 12.8234 0.0 29.1967   Low
cufflinks 18.3642 0.0 41.1119    
cufflinks 17.3106 0.0 38.7755    
cufflinks 27.6734 0.0 61.3182    
cufflinks 36.6449 0.0 81.0387 High High

0 Strain