Gene : Eucgr.E03856 E. grandis v2.0
Defline:  (1 of 3) PTHR13994:SF14 - NUDIX HYDROLASE 2 Genomic Order:  3127
Name:  ? Eucgr.E03856 Secondary Identifier:  ? PAC:32028595
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5381 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03856 0.5kb upstream 0.5kb upstream 4587 true Chr05: 73104531-73109117 Eucalyptus grandis
Eucgr.E03856 0.5kb upstream 0.5kb upstream 500 false Chr05: 73104531-73105030 Eucalyptus grandis
Eucgr.E03856 0.5kb downstream 0.5kb downstream 4587 true Chr05: 73105031-73109617 Eucalyptus grandis
Eucgr.E03856 0.5kb downstream 0.5kb downstream 500 false Chr05: 73109118-73109617 Eucalyptus grandis
Eucgr.E03856 1.0kb upstream 1.0kb upstream 5087 true Chr05: 73104031-73109117 Eucalyptus grandis
Eucgr.E03856 1.0kb upstream 1.0kb upstream 1000 false Chr05: 73104031-73105030 Eucalyptus grandis
Eucgr.E03856 1.0kb downstream 1.0kb downstream 5087 true Chr05: 73105031-73110117 Eucalyptus grandis
Eucgr.E03856 1.0kb downstream 1.0kb downstream 1000 false Chr05: 73109118-73110117 Eucalyptus grandis
Eucgr.E03856 2.0kb upstream 2.0kb upstream 6087 true Chr05: 73103031-73109117 Eucalyptus grandis
Eucgr.E03856 2.0kb upstream 2.0kb upstream 2000 false Chr05: 73103031-73105030 Eucalyptus grandis
Eucgr.E03856 2.0kb downstream 2.0kb downstream 6087 true Chr05: 73105031-73111117 Eucalyptus grandis
Eucgr.E03856 2.0kb downstream 2.0kb downstream 2000 false Chr05: 73109118-73111117 Eucalyptus grandis
Eucgr.E03856 5.0kb upstream 5.0kb upstream 9087 true Chr05: 73100031-73109117 Eucalyptus grandis
Eucgr.E03856 5.0kb upstream 5.0kb upstream 5000 false Chr05: 73100031-73105030 Eucalyptus grandis
Eucgr.E03856 5.0kb downstream 5.0kb downstream 9087 true Chr05: 73105031-73114117 Eucalyptus grandis
Eucgr.E03856 5.0kb downstream 5.0kb downstream 5000 false Chr05: 73109118-73114117 Eucalyptus grandis
Eucgr.E03856 10.0kb upstream 10.0kb upstream 14087 true Chr05: 73095031-73109117 Eucalyptus grandis
Eucgr.E03856 10.0kb upstream 10.0kb upstream 10000 false Chr05: 73095031-73105030 Eucalyptus grandis
Eucgr.E03856 10.0kb downstream 10.0kb downstream 14087 true Chr05: 73105031-73119117 Eucalyptus grandis
Eucgr.E03856 10.0kb downstream 10.0kb downstream 10000 false Chr05: 73109118-73119117 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.00574 0.0 17.0009    
cufflinks 0.968766 0.0 2.86683   Low
cufflinks 5.07223 0.0 12.7063    
cufflinks 7.38354 0.0 17.7561    
cufflinks 5.02814 0.0 12.5938    
cufflinks 6.0794 0.0 14.9766    

0 Strain