Gene : Eucgr.E03821 E. grandis v2.0
Defline:  (1 of 1) KOG0472//KOG0531 - Leucine-rich repeat protein // Protein phosphatase 1, regulatory subunit, and related proteins Genomic Order:  2652
Name:  ? Eucgr.E03821 Secondary Identifier:  ? PAC:32031433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03821 0.5kb upstream 0.5kb upstream 3290 true Chr05: 62293856-62297145 Eucalyptus grandis
Eucgr.E03821 0.5kb upstream 0.5kb upstream 500 false Chr05: 62296646-62297145 Eucalyptus grandis
Eucgr.E03821 0.5kb downstream 0.5kb downstream 3290 true Chr05: 62293356-62296645 Eucalyptus grandis
Eucgr.E03821 0.5kb downstream 0.5kb downstream 500 false Chr05: 62293356-62293855 Eucalyptus grandis
Eucgr.E03821 1.0kb upstream 1.0kb upstream 3790 true Chr05: 62293856-62297645 Eucalyptus grandis
Eucgr.E03821 1.0kb upstream 1.0kb upstream 1000 false Chr05: 62296646-62297645 Eucalyptus grandis
Eucgr.E03821 1.0kb downstream 1.0kb downstream 3790 true Chr05: 62292856-62296645 Eucalyptus grandis
Eucgr.E03821 1.0kb downstream 1.0kb downstream 1000 false Chr05: 62292856-62293855 Eucalyptus grandis
Eucgr.E03821 2.0kb upstream 2.0kb upstream 4790 true Chr05: 62293856-62298645 Eucalyptus grandis
Eucgr.E03821 2.0kb upstream 2.0kb upstream 2000 false Chr05: 62296646-62298645 Eucalyptus grandis
Eucgr.E03821 2.0kb downstream 2.0kb downstream 4790 true Chr05: 62291856-62296645 Eucalyptus grandis
Eucgr.E03821 2.0kb downstream 2.0kb downstream 2000 false Chr05: 62291856-62293855 Eucalyptus grandis
Eucgr.E03821 5.0kb upstream 5.0kb upstream 7790 true Chr05: 62293856-62301645 Eucalyptus grandis
Eucgr.E03821 5.0kb upstream 5.0kb upstream 5000 false Chr05: 62296646-62301645 Eucalyptus grandis
Eucgr.E03821 5.0kb downstream 5.0kb downstream 7790 true Chr05: 62288856-62296645 Eucalyptus grandis
Eucgr.E03821 5.0kb downstream 5.0kb downstream 5000 false Chr05: 62288856-62293855 Eucalyptus grandis
Eucgr.E03821 10.0kb upstream 10.0kb upstream 12790 true Chr05: 62293856-62306645 Eucalyptus grandis
Eucgr.E03821 10.0kb upstream 10.0kb upstream 10000 false Chr05: 62296646-62306645 Eucalyptus grandis
Eucgr.E03821 10.0kb downstream 10.0kb downstream 12790 true Chr05: 62283856-62296645 Eucalyptus grandis
Eucgr.E03821 10.0kb downstream 10.0kb downstream 10000 false Chr05: 62283856-62293855 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665658 5273 Angiosperm View MSA
124051323 5270 Rosid View MSA
123620111 5271 Pentapetalae View MSA
122654527 5272 Eudicot View MSA
120937622 5274 Embryophyte View MSA
122978103 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.917808 0.0 2.55034    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.0777 0.0 2.92949    
cufflinks 1.26733 0.0 3.37397    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.27562 0.0 0.886412 Low Low

0 Strain