Gene : Eucgr.E03468 E. grandis v2.0
Defline:  (1 of 3) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  2614
Name:  ? Eucgr.E03468 Secondary Identifier:  ? PAC:32029238
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5129 Eucalyptus grandis pathologic  
Egrandis PWY-6483 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03468 0.5kb upstream 0.5kb upstream 5757 true Chr05: 60898241-60903997 Eucalyptus grandis
Eucgr.E03468 0.5kb upstream 0.5kb upstream 500 false Chr05: 60903498-60903997 Eucalyptus grandis
Eucgr.E03468 0.5kb downstream 0.5kb downstream 5757 true Chr05: 60897741-60903497 Eucalyptus grandis
Eucgr.E03468 0.5kb downstream 0.5kb downstream 500 false Chr05: 60897741-60898240 Eucalyptus grandis
Eucgr.E03468 1.0kb upstream 1.0kb upstream 6257 true Chr05: 60898241-60904497 Eucalyptus grandis
Eucgr.E03468 1.0kb upstream 1.0kb upstream 1000 false Chr05: 60903498-60904497 Eucalyptus grandis
Eucgr.E03468 1.0kb downstream 1.0kb downstream 6257 true Chr05: 60897241-60903497 Eucalyptus grandis
Eucgr.E03468 1.0kb downstream 1.0kb downstream 1000 false Chr05: 60897241-60898240 Eucalyptus grandis
Eucgr.E03468 2.0kb upstream 2.0kb upstream 7257 true Chr05: 60898241-60905497 Eucalyptus grandis
Eucgr.E03468 2.0kb upstream 2.0kb upstream 2000 false Chr05: 60903498-60905497 Eucalyptus grandis
Eucgr.E03468 2.0kb downstream 2.0kb downstream 7257 true Chr05: 60896241-60903497 Eucalyptus grandis
Eucgr.E03468 2.0kb downstream 2.0kb downstream 2000 false Chr05: 60896241-60898240 Eucalyptus grandis
Eucgr.E03468 5.0kb upstream 5.0kb upstream 10257 true Chr05: 60898241-60908497 Eucalyptus grandis
Eucgr.E03468 5.0kb upstream 5.0kb upstream 5000 false Chr05: 60903498-60908497 Eucalyptus grandis
Eucgr.E03468 5.0kb downstream 5.0kb downstream 10257 true Chr05: 60893241-60903497 Eucalyptus grandis
Eucgr.E03468 5.0kb downstream 5.0kb downstream 5000 false Chr05: 60893241-60898240 Eucalyptus grandis
Eucgr.E03468 10.0kb upstream 10.0kb upstream 15257 true Chr05: 60898241-60913497 Eucalyptus grandis
Eucgr.E03468 10.0kb upstream 10.0kb upstream 10000 false Chr05: 60903498-60913497 Eucalyptus grandis
Eucgr.E03468 10.0kb downstream 10.0kb downstream 15257 true Chr05: 60888241-60903497 Eucalyptus grandis
Eucgr.E03468 10.0kb downstream 10.0kb downstream 10000 false Chr05: 60888241-60898240 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.94074 0.0 10.0046    
cufflinks 2.49517 0.0 6.88267   Low
cufflinks 4.01123 0.0 10.0889    
cufflinks 3.87223 0.0 9.774    
cufflinks 2.45743 0.0 6.78012   Low
cufflinks 3.03595 0.0 8.13144    

0 Strain