Gene : Eucgr.E03472 E. grandis v2.0
Defline:  (1 of 3) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  2618
Name:  ? Eucgr.E03472 Secondary Identifier:  ? PAC:32031983
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5129 Eucalyptus grandis pathologic  
Egrandis PWY-6483 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E03472 0.5kb upstream 0.5kb upstream 5469 true Chr05: 60952267-60957735 Eucalyptus grandis
Eucgr.E03472 0.5kb upstream 0.5kb upstream 500 false Chr05: 60957236-60957735 Eucalyptus grandis
Eucgr.E03472 0.5kb downstream 0.5kb downstream 5469 true Chr05: 60951767-60957235 Eucalyptus grandis
Eucgr.E03472 0.5kb downstream 0.5kb downstream 500 false Chr05: 60951767-60952266 Eucalyptus grandis
Eucgr.E03472 1.0kb upstream 1.0kb upstream 5969 true Chr05: 60952267-60958235 Eucalyptus grandis
Eucgr.E03472 1.0kb upstream 1.0kb upstream 1000 false Chr05: 60957236-60958235 Eucalyptus grandis
Eucgr.E03472 1.0kb downstream 1.0kb downstream 5969 true Chr05: 60951267-60957235 Eucalyptus grandis
Eucgr.E03472 1.0kb downstream 1.0kb downstream 1000 false Chr05: 60951267-60952266 Eucalyptus grandis
Eucgr.E03472 2.0kb upstream 2.0kb upstream 6969 true Chr05: 60952267-60959235 Eucalyptus grandis
Eucgr.E03472 2.0kb upstream 2.0kb upstream 2000 false Chr05: 60957236-60959235 Eucalyptus grandis
Eucgr.E03472 2.0kb downstream 2.0kb downstream 6969 true Chr05: 60950267-60957235 Eucalyptus grandis
Eucgr.E03472 2.0kb downstream 2.0kb downstream 2000 false Chr05: 60950267-60952266 Eucalyptus grandis
Eucgr.E03472 5.0kb upstream 5.0kb upstream 9969 true Chr05: 60952267-60962235 Eucalyptus grandis
Eucgr.E03472 5.0kb upstream 5.0kb upstream 5000 false Chr05: 60957236-60962235 Eucalyptus grandis
Eucgr.E03472 5.0kb downstream 5.0kb downstream 9969 true Chr05: 60947267-60957235 Eucalyptus grandis
Eucgr.E03472 5.0kb downstream 5.0kb downstream 5000 false Chr05: 60947267-60952266 Eucalyptus grandis
Eucgr.E03472 10.0kb upstream 10.0kb upstream 14969 true Chr05: 60952267-60967235 Eucalyptus grandis
Eucgr.E03472 10.0kb upstream 10.0kb upstream 10000 false Chr05: 60957236-60967235 Eucalyptus grandis
Eucgr.E03472 10.0kb downstream 10.0kb downstream 14969 true Chr05: 60942267-60957235 Eucalyptus grandis
Eucgr.E03472 10.0kb downstream 10.0kb downstream 10000 false Chr05: 60942267-60952266 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55106 0.0 6.69412    
cufflinks 1.55623 0.0 4.26877   Low
cufflinks 3.01163 0.0 7.7552    
cufflinks 3.67672 0.0 9.23394   High
cufflinks 2.96196 0.0 7.64039    
cufflinks 2.78625 0.0 7.25362    

0 Strain