Gene : Eucgr.A00501 E. grandis v2.0
Defline:  (1 of 2) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  1782
Name:  ? Eucgr.A00501 Secondary Identifier:  ? PAC:32057818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00501 0.5kb upstream 0.5kb upstream 5195 true Chr06: 29443889-29449083 Eucalyptus grandis
Eucgr.A00501 0.5kb upstream 0.5kb upstream 500 false Chr06: 29443889-29444388 Eucalyptus grandis
Eucgr.A00501 0.5kb downstream 0.5kb downstream 5195 true Chr06: 29444389-29449583 Eucalyptus grandis
Eucgr.A00501 0.5kb downstream 0.5kb downstream 500 false Chr06: 29449084-29449583 Eucalyptus grandis
Eucgr.A00501 1.0kb upstream 1.0kb upstream 5695 true Chr06: 29443389-29449083 Eucalyptus grandis
Eucgr.A00501 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29443389-29444388 Eucalyptus grandis
Eucgr.A00501 1.0kb downstream 1.0kb downstream 5695 true Chr06: 29444389-29450083 Eucalyptus grandis
Eucgr.A00501 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29449084-29450083 Eucalyptus grandis
Eucgr.A00501 2.0kb upstream 2.0kb upstream 6695 true Chr06: 29442389-29449083 Eucalyptus grandis
Eucgr.A00501 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29442389-29444388 Eucalyptus grandis
Eucgr.A00501 2.0kb downstream 2.0kb downstream 6695 true Chr06: 29444389-29451083 Eucalyptus grandis
Eucgr.A00501 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29449084-29451083 Eucalyptus grandis
Eucgr.A00501 5.0kb upstream 5.0kb upstream 9695 true Chr06: 29439389-29449083 Eucalyptus grandis
Eucgr.A00501 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29439389-29444388 Eucalyptus grandis
Eucgr.A00501 5.0kb downstream 5.0kb downstream 9695 true Chr06: 29444389-29454083 Eucalyptus grandis
Eucgr.A00501 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29449084-29454083 Eucalyptus grandis
Eucgr.A00501 10.0kb upstream 10.0kb upstream 14695 true Chr06: 29434389-29449083 Eucalyptus grandis
Eucgr.A00501 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29434389-29444388 Eucalyptus grandis
Eucgr.A00501 10.0kb downstream 10.0kb downstream 14695 true Chr06: 29444389-29459083 Eucalyptus grandis
Eucgr.A00501 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29449084-29459083 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069007 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.7533 0.0 108.661 High  
cufflinks 22.5882 0.0 50.0707   Low
cufflinks 48.085 0.0 109.715 High  
cufflinks 50.245 0.0 115.317 High  
cufflinks 29.4725 0.0 65.7053    
cufflinks 36.4626 0.0 81.6559 High  

0 Strain