Gene : Eucgr.B00022 E. grandis v2.0
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  2103
Name:  ? Eucgr.B00022 Secondary Identifier:  ? PAC:32053211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00022 0.5kb upstream 0.5kb upstream 7341 true Chr06: 35511249-35518589 Eucalyptus grandis
Eucgr.B00022 0.5kb upstream 0.5kb upstream 500 false Chr06: 35518090-35518589 Eucalyptus grandis
Eucgr.B00022 0.5kb downstream 0.5kb downstream 7341 true Chr06: 35510749-35518089 Eucalyptus grandis
Eucgr.B00022 0.5kb downstream 0.5kb downstream 500 false Chr06: 35510749-35511248 Eucalyptus grandis
Eucgr.B00022 1.0kb upstream 1.0kb upstream 7841 true Chr06: 35511249-35519089 Eucalyptus grandis
Eucgr.B00022 1.0kb upstream 1.0kb upstream 1000 false Chr06: 35518090-35519089 Eucalyptus grandis
Eucgr.B00022 1.0kb downstream 1.0kb downstream 7841 true Chr06: 35510249-35518089 Eucalyptus grandis
Eucgr.B00022 1.0kb downstream 1.0kb downstream 1000 false Chr06: 35510249-35511248 Eucalyptus grandis
Eucgr.B00022 2.0kb upstream 2.0kb upstream 8841 true Chr06: 35511249-35520089 Eucalyptus grandis
Eucgr.B00022 2.0kb upstream 2.0kb upstream 2000 false Chr06: 35518090-35520089 Eucalyptus grandis
Eucgr.B00022 2.0kb downstream 2.0kb downstream 8841 true Chr06: 35509249-35518089 Eucalyptus grandis
Eucgr.B00022 2.0kb downstream 2.0kb downstream 2000 false Chr06: 35509249-35511248 Eucalyptus grandis
Eucgr.B00022 5.0kb upstream 5.0kb upstream 11841 true Chr06: 35511249-35523089 Eucalyptus grandis
Eucgr.B00022 5.0kb upstream 5.0kb upstream 5000 false Chr06: 35518090-35523089 Eucalyptus grandis
Eucgr.B00022 5.0kb downstream 5.0kb downstream 11841 true Chr06: 35506249-35518089 Eucalyptus grandis
Eucgr.B00022 5.0kb downstream 5.0kb downstream 5000 false Chr06: 35506249-35511248 Eucalyptus grandis
Eucgr.B00022 10.0kb upstream 10.0kb upstream 16841 true Chr06: 35511249-35528089 Eucalyptus grandis
Eucgr.B00022 10.0kb upstream 10.0kb upstream 10000 false Chr06: 35518090-35528089 Eucalyptus grandis
Eucgr.B00022 10.0kb downstream 10.0kb downstream 16841 true Chr06: 35501249-35518089 Eucalyptus grandis
Eucgr.B00022 10.0kb downstream 10.0kb downstream 10000 false Chr06: 35501249-35511248 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065046 5270 Rosid View MSA
123736440 5271 Pentapetalae View MSA
122793822 5272 Eudicot View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.5364 0.0 52.2509    
cufflinks 17.9719 0.0 40.1695    
cufflinks 30.6937 0.0 67.8928 High High
cufflinks 18.8694 0.0 42.1166    
cufflinks 11.9677 0.0 27.4091   Low
cufflinks 16.6048 0.0 37.2915    

0 Strain