Gene : Eucgr.A00486 E. grandis v2.0
Defline:  (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 Genomic Order:  1795
Name:  ? Eucgr.A00486 Secondary Identifier:  ? PAC:32052692
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00486 0.5kb upstream 0.5kb upstream 3669 true Chr06: 29642847-29646515 Eucalyptus grandis
Eucgr.A00486 0.5kb upstream 0.5kb upstream 500 false Chr06: 29642847-29643346 Eucalyptus grandis
Eucgr.A00486 0.5kb downstream 0.5kb downstream 3669 true Chr06: 29643347-29647015 Eucalyptus grandis
Eucgr.A00486 0.5kb downstream 0.5kb downstream 500 false Chr06: 29646516-29647015 Eucalyptus grandis
Eucgr.A00486 1.0kb upstream 1.0kb upstream 4169 true Chr06: 29642347-29646515 Eucalyptus grandis
Eucgr.A00486 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29642347-29643346 Eucalyptus grandis
Eucgr.A00486 1.0kb downstream 1.0kb downstream 4169 true Chr06: 29643347-29647515 Eucalyptus grandis
Eucgr.A00486 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29646516-29647515 Eucalyptus grandis
Eucgr.A00486 2.0kb upstream 2.0kb upstream 5169 true Chr06: 29641347-29646515 Eucalyptus grandis
Eucgr.A00486 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29641347-29643346 Eucalyptus grandis
Eucgr.A00486 2.0kb downstream 2.0kb downstream 5169 true Chr06: 29643347-29648515 Eucalyptus grandis
Eucgr.A00486 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29646516-29648515 Eucalyptus grandis
Eucgr.A00486 5.0kb upstream 5.0kb upstream 8169 true Chr06: 29638347-29646515 Eucalyptus grandis
Eucgr.A00486 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29638347-29643346 Eucalyptus grandis
Eucgr.A00486 5.0kb downstream 5.0kb downstream 8169 true Chr06: 29643347-29651515 Eucalyptus grandis
Eucgr.A00486 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29646516-29651515 Eucalyptus grandis
Eucgr.A00486 10.0kb upstream 10.0kb upstream 13169 true Chr06: 29633347-29646515 Eucalyptus grandis
Eucgr.A00486 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29633347-29643346 Eucalyptus grandis
Eucgr.A00486 10.0kb downstream 10.0kb downstream 13169 true Chr06: 29643347-29656515 Eucalyptus grandis
Eucgr.A00486 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29646516-29656515 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2134 0.0 69.1826 High  
cufflinks 47.9358 0.0 108.201 High  
cufflinks 35.2309 0.0 78.3749 High  
cufflinks 77.1846 0.0 179.705 High High
cufflinks 68.4795 0.0 157.367 High  
cufflinks 22.0087 0.0 48.6983   Low

0 Strain