Gene : Eucgr.K01962 E. grandis v2.0
Defline:  (1 of 3) PF01055//PF13802//PF16863 - Glycosyl hydrolases family 31 (Glyco_hydro_31) // Galactose mutarotase-like (Gal_mutarotas_2) // N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase (NtCtMGAM_N) Genomic Order:  1671
Name:  ? Eucgr.K01962 Secondary Identifier:  ? PAC:32030348
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01962 0.5kb upstream 0.5kb upstream 7402 true Chr05: 31466910-31474311 Eucalyptus grandis
Eucgr.K01962 0.5kb upstream 0.5kb upstream 500 false Chr05: 31466910-31467409 Eucalyptus grandis
Eucgr.K01962 0.5kb downstream 0.5kb downstream 7402 true Chr05: 31467410-31474811 Eucalyptus grandis
Eucgr.K01962 0.5kb downstream 0.5kb downstream 500 false Chr05: 31474312-31474811 Eucalyptus grandis
Eucgr.K01962 1.0kb upstream 1.0kb upstream 7902 true Chr05: 31466410-31474311 Eucalyptus grandis
Eucgr.K01962 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31466410-31467409 Eucalyptus grandis
Eucgr.K01962 1.0kb downstream 1.0kb downstream 7902 true Chr05: 31467410-31475311 Eucalyptus grandis
Eucgr.K01962 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31474312-31475311 Eucalyptus grandis
Eucgr.K01962 2.0kb upstream 2.0kb upstream 8902 true Chr05: 31465410-31474311 Eucalyptus grandis
Eucgr.K01962 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31465410-31467409 Eucalyptus grandis
Eucgr.K01962 2.0kb downstream 2.0kb downstream 8902 true Chr05: 31467410-31476311 Eucalyptus grandis
Eucgr.K01962 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31474312-31476311 Eucalyptus grandis
Eucgr.K01962 5.0kb upstream 5.0kb upstream 11902 true Chr05: 31462410-31474311 Eucalyptus grandis
Eucgr.K01962 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31462410-31467409 Eucalyptus grandis
Eucgr.K01962 5.0kb downstream 5.0kb downstream 11902 true Chr05: 31467410-31479311 Eucalyptus grandis
Eucgr.K01962 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31474312-31479311 Eucalyptus grandis
Eucgr.K01962 10.0kb upstream 10.0kb upstream 16902 true Chr05: 31457410-31474311 Eucalyptus grandis
Eucgr.K01962 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31457410-31467409 Eucalyptus grandis
Eucgr.K01962 10.0kb downstream 10.0kb downstream 16902 true Chr05: 31467410-31484311 Eucalyptus grandis
Eucgr.K01962 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31474312-31484311 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063402 5270 Rosid View MSA
123748401 5271 Pentapetalae View MSA
122786472 5272 Eudicot View MSA
122047200 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.434079 0.0 1.29689 Low Low
cufflinks 40.2114 0.0 90.8816   High
cufflinks 0.52745 0.0 1.53756    
cufflinks 13.7261 0.0 30.3979    
cufflinks 3.25017 0.0 7.87314    
cufflinks 1.96216 0.0 5.02419    

0 Strain