Gene : Eucgr.A00473 E. grandis v2.0
Defline:  (1 of 1) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  1808
Name:  ? Eucgr.A00473 Secondary Identifier:  ? PAC:32056699
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00473 0.5kb upstream 0.5kb upstream 18544 true Chr06: 29878829-29897372 Eucalyptus grandis
Eucgr.A00473 0.5kb upstream 0.5kb upstream 500 false Chr06: 29878829-29879328 Eucalyptus grandis
Eucgr.A00473 0.5kb downstream 0.5kb downstream 18544 true Chr06: 29879329-29897872 Eucalyptus grandis
Eucgr.A00473 0.5kb downstream 0.5kb downstream 500 false Chr06: 29897373-29897872 Eucalyptus grandis
Eucgr.A00473 1.0kb upstream 1.0kb upstream 19044 true Chr06: 29878329-29897372 Eucalyptus grandis
Eucgr.A00473 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29878329-29879328 Eucalyptus grandis
Eucgr.A00473 1.0kb downstream 1.0kb downstream 19044 true Chr06: 29879329-29898372 Eucalyptus grandis
Eucgr.A00473 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29897373-29898372 Eucalyptus grandis
Eucgr.A00473 2.0kb upstream 2.0kb upstream 20044 true Chr06: 29877329-29897372 Eucalyptus grandis
Eucgr.A00473 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29877329-29879328 Eucalyptus grandis
Eucgr.A00473 2.0kb downstream 2.0kb downstream 20044 true Chr06: 29879329-29899372 Eucalyptus grandis
Eucgr.A00473 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29897373-29899372 Eucalyptus grandis
Eucgr.A00473 5.0kb upstream 5.0kb upstream 23044 true Chr06: 29874329-29897372 Eucalyptus grandis
Eucgr.A00473 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29874329-29879328 Eucalyptus grandis
Eucgr.A00473 5.0kb downstream 5.0kb downstream 23044 true Chr06: 29879329-29902372 Eucalyptus grandis
Eucgr.A00473 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29897373-29902372 Eucalyptus grandis
Eucgr.A00473 10.0kb upstream 10.0kb upstream 28044 true Chr06: 29869329-29897372 Eucalyptus grandis
Eucgr.A00473 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29869329-29879328 Eucalyptus grandis
Eucgr.A00473 10.0kb downstream 10.0kb downstream 28044 true Chr06: 29879329-29907372 Eucalyptus grandis
Eucgr.A00473 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29897373-29907372 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062272 5270 Rosid View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3436 0.0 46.2496   Low
cufflinks 45.2127 0.0 103.532 High  
cufflinks 22.4389 0.0 51.3858    
cufflinks 51.9742 0.0 120.333 High High
cufflinks 32.4277 0.0 76.492    
cufflinks 24.045 0.0 55.1173    

0 Strain