Gene : Eucgr.K01953 E. grandis v2.0
Defline:  (1 of 4) PF01055//PF16863 - Glycosyl hydrolases family 31 (Glyco_hydro_31) // N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase (NtCtMGAM_N) Genomic Order:  1679
Name:  ? Eucgr.K01953 Secondary Identifier:  ? PAC:32028798
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01953 0.5kb upstream 0.5kb upstream 4519 true Chr05: 31728277-31732795 Eucalyptus grandis
Eucgr.K01953 0.5kb upstream 0.5kb upstream 500 false Chr05: 31728277-31728776 Eucalyptus grandis
Eucgr.K01953 0.5kb downstream 0.5kb downstream 4519 true Chr05: 31728777-31733295 Eucalyptus grandis
Eucgr.K01953 0.5kb downstream 0.5kb downstream 500 false Chr05: 31732796-31733295 Eucalyptus grandis
Eucgr.K01953 1.0kb upstream 1.0kb upstream 5019 true Chr05: 31727777-31732795 Eucalyptus grandis
Eucgr.K01953 1.0kb upstream 1.0kb upstream 1000 false Chr05: 31727777-31728776 Eucalyptus grandis
Eucgr.K01953 1.0kb downstream 1.0kb downstream 5019 true Chr05: 31728777-31733795 Eucalyptus grandis
Eucgr.K01953 1.0kb downstream 1.0kb downstream 1000 false Chr05: 31732796-31733795 Eucalyptus grandis
Eucgr.K01953 2.0kb upstream 2.0kb upstream 6019 true Chr05: 31726777-31732795 Eucalyptus grandis
Eucgr.K01953 2.0kb upstream 2.0kb upstream 2000 false Chr05: 31726777-31728776 Eucalyptus grandis
Eucgr.K01953 2.0kb downstream 2.0kb downstream 6019 true Chr05: 31728777-31734795 Eucalyptus grandis
Eucgr.K01953 2.0kb downstream 2.0kb downstream 2000 false Chr05: 31732796-31734795 Eucalyptus grandis
Eucgr.K01953 5.0kb upstream 5.0kb upstream 9019 true Chr05: 31723777-31732795 Eucalyptus grandis
Eucgr.K01953 5.0kb upstream 5.0kb upstream 5000 false Chr05: 31723777-31728776 Eucalyptus grandis
Eucgr.K01953 5.0kb downstream 5.0kb downstream 9019 true Chr05: 31728777-31737795 Eucalyptus grandis
Eucgr.K01953 5.0kb downstream 5.0kb downstream 5000 false Chr05: 31732796-31737795 Eucalyptus grandis
Eucgr.K01953 10.0kb upstream 10.0kb upstream 14019 true Chr05: 31718777-31732795 Eucalyptus grandis
Eucgr.K01953 10.0kb upstream 10.0kb upstream 10000 false Chr05: 31718777-31728776 Eucalyptus grandis
Eucgr.K01953 10.0kb downstream 10.0kb downstream 14019 true Chr05: 31728777-31742795 Eucalyptus grandis
Eucgr.K01953 10.0kb downstream 10.0kb downstream 10000 false Chr05: 31732796-31742795 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063402 5270 Rosid View MSA
123748401 5271 Pentapetalae View MSA
122786472 5272 Eudicot View MSA
122047200 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.886202 0.0 2.48372   High
cufflinks 0.402056 0.0 1.22326 Low  
cufflinks 0.60017 0.0 1.75029    
cufflinks 0.0337816 0.0 0.164456 Low  
cufflinks 0.0443712 0.0 0.194993 Low  
cufflinks 0.0343074 0.0 0.169345 Low  

0 Strain