Gene : Eucgr.E04341 E. grandis v2.0
Defline:  (1 of 1) KOG1872 - Ubiquitin-specific protease Genomic Order:  3287
Name:  ? Eucgr.E04341 Secondary Identifier:  ? PAC:32027997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04341 0.5kb upstream 0.5kb upstream 6954 true Chr05: 75830205-75837158 Eucalyptus grandis
Eucgr.E04341 0.5kb upstream 0.5kb upstream 500 false Chr05: 75836659-75837158 Eucalyptus grandis
Eucgr.E04341 0.5kb downstream 0.5kb downstream 6954 true Chr05: 75829705-75836658 Eucalyptus grandis
Eucgr.E04341 0.5kb downstream 0.5kb downstream 500 false Chr05: 75829705-75830204 Eucalyptus grandis
Eucgr.E04341 1.0kb upstream 1.0kb upstream 7454 true Chr05: 75830205-75837658 Eucalyptus grandis
Eucgr.E04341 1.0kb upstream 1.0kb upstream 1000 false Chr05: 75836659-75837658 Eucalyptus grandis
Eucgr.E04341 1.0kb downstream 1.0kb downstream 7454 true Chr05: 75829205-75836658 Eucalyptus grandis
Eucgr.E04341 1.0kb downstream 1.0kb downstream 1000 false Chr05: 75829205-75830204 Eucalyptus grandis
Eucgr.E04341 2.0kb upstream 2.0kb upstream 8454 true Chr05: 75830205-75838658 Eucalyptus grandis
Eucgr.E04341 2.0kb upstream 2.0kb upstream 2000 false Chr05: 75836659-75838658 Eucalyptus grandis
Eucgr.E04341 2.0kb downstream 2.0kb downstream 8454 true Chr05: 75828205-75836658 Eucalyptus grandis
Eucgr.E04341 2.0kb downstream 2.0kb downstream 2000 false Chr05: 75828205-75830204 Eucalyptus grandis
Eucgr.E04341 5.0kb upstream 5.0kb upstream 11454 true Chr05: 75830205-75841658 Eucalyptus grandis
Eucgr.E04341 5.0kb upstream 5.0kb upstream 5000 false Chr05: 75836659-75841658 Eucalyptus grandis
Eucgr.E04341 5.0kb downstream 5.0kb downstream 11454 true Chr05: 75825205-75836658 Eucalyptus grandis
Eucgr.E04341 5.0kb downstream 5.0kb downstream 5000 false Chr05: 75825205-75830204 Eucalyptus grandis
Eucgr.E04341 10.0kb upstream 10.0kb upstream 16454 true Chr05: 75830205-75846658 Eucalyptus grandis
Eucgr.E04341 10.0kb upstream 10.0kb upstream 10000 false Chr05: 75836659-75846658 Eucalyptus grandis
Eucgr.E04341 10.0kb downstream 10.0kb downstream 16454 true Chr05: 75820205-75836658 Eucalyptus grandis
Eucgr.E04341 10.0kb downstream 10.0kb downstream 10000 false Chr05: 75820205-75830204 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98112 0.0 14.1778    
cufflinks 5.44238 0.0 12.8996    
cufflinks 6.69072 0.0 15.6436    
cufflinks 5.97983 0.0 14.0566    
cufflinks 6.09519 0.0 14.3636    
cufflinks 8.72122 0.0 20.1593   High

0 Strain