Gene : Eucgr.E04318 E. grandis v2.0
Defline:  (1 of 1) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  3265
Name:  ? Eucgr.E04318 Secondary Identifier:  ? PAC:32031912
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5963 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04318 0.5kb upstream 0.5kb upstream 4195 true Chr05: 75655657-75659851 Eucalyptus grandis
Eucgr.E04318 0.5kb upstream 0.5kb upstream 500 false Chr05: 75659352-75659851 Eucalyptus grandis
Eucgr.E04318 0.5kb downstream 0.5kb downstream 4195 true Chr05: 75655157-75659351 Eucalyptus grandis
Eucgr.E04318 0.5kb downstream 0.5kb downstream 500 false Chr05: 75655157-75655656 Eucalyptus grandis
Eucgr.E04318 1.0kb upstream 1.0kb upstream 4695 true Chr05: 75655657-75660351 Eucalyptus grandis
Eucgr.E04318 1.0kb upstream 1.0kb upstream 1000 false Chr05: 75659352-75660351 Eucalyptus grandis
Eucgr.E04318 1.0kb downstream 1.0kb downstream 4695 true Chr05: 75654657-75659351 Eucalyptus grandis
Eucgr.E04318 1.0kb downstream 1.0kb downstream 1000 false Chr05: 75654657-75655656 Eucalyptus grandis
Eucgr.E04318 2.0kb upstream 2.0kb upstream 5695 true Chr05: 75655657-75661351 Eucalyptus grandis
Eucgr.E04318 2.0kb upstream 2.0kb upstream 2000 false Chr05: 75659352-75661351 Eucalyptus grandis
Eucgr.E04318 2.0kb downstream 2.0kb downstream 5695 true Chr05: 75653657-75659351 Eucalyptus grandis
Eucgr.E04318 2.0kb downstream 2.0kb downstream 2000 false Chr05: 75653657-75655656 Eucalyptus grandis
Eucgr.E04318 5.0kb upstream 5.0kb upstream 8695 true Chr05: 75655657-75664351 Eucalyptus grandis
Eucgr.E04318 5.0kb upstream 5.0kb upstream 5000 false Chr05: 75659352-75664351 Eucalyptus grandis
Eucgr.E04318 5.0kb downstream 5.0kb downstream 8695 true Chr05: 75650657-75659351 Eucalyptus grandis
Eucgr.E04318 5.0kb downstream 5.0kb downstream 5000 false Chr05: 75650657-75655656 Eucalyptus grandis
Eucgr.E04318 10.0kb upstream 10.0kb upstream 13695 true Chr05: 75655657-75669351 Eucalyptus grandis
Eucgr.E04318 10.0kb upstream 10.0kb upstream 10000 false Chr05: 75659352-75669351 Eucalyptus grandis
Eucgr.E04318 10.0kb downstream 10.0kb downstream 13695 true Chr05: 75645657-75659351 Eucalyptus grandis
Eucgr.E04318 10.0kb downstream 10.0kb downstream 10000 false Chr05: 75645657-75655656 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.7792 0.0 54.5342    
cufflinks 4.3349 0.0 11.9665    
cufflinks 30.1917 0.0 78.2835 High High
cufflinks 0.578838 0.0 2.15291   Low
cufflinks 0.872517 0.0 3.1183   Low
cufflinks 14.1967 0.0 42.3104    

0 Strain