Gene : Eucgr.E04232 E. grandis v2.0
Defline:  (1 of 2) PTHR31314:SF5 - MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED Genomic Order:  3192
Name:  ? Eucgr.E04232 Secondary Identifier:  ? PAC:32029014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04232 0.5kb upstream 0.5kb upstream 6537 true Chr05: 74981464-74988000 Eucalyptus grandis
Eucgr.E04232 0.5kb upstream 0.5kb upstream 500 false Chr05: 74981464-74981963 Eucalyptus grandis
Eucgr.E04232 0.5kb downstream 0.5kb downstream 6537 true Chr05: 74981964-74988500 Eucalyptus grandis
Eucgr.E04232 0.5kb downstream 0.5kb downstream 500 false Chr05: 74988001-74988500 Eucalyptus grandis
Eucgr.E04232 1.0kb upstream 1.0kb upstream 7037 true Chr05: 74980964-74988000 Eucalyptus grandis
Eucgr.E04232 1.0kb upstream 1.0kb upstream 1000 false Chr05: 74980964-74981963 Eucalyptus grandis
Eucgr.E04232 1.0kb downstream 1.0kb downstream 7037 true Chr05: 74981964-74989000 Eucalyptus grandis
Eucgr.E04232 1.0kb downstream 1.0kb downstream 1000 false Chr05: 74988001-74989000 Eucalyptus grandis
Eucgr.E04232 2.0kb upstream 2.0kb upstream 8037 true Chr05: 74979964-74988000 Eucalyptus grandis
Eucgr.E04232 2.0kb upstream 2.0kb upstream 2000 false Chr05: 74979964-74981963 Eucalyptus grandis
Eucgr.E04232 2.0kb downstream 2.0kb downstream 8037 true Chr05: 74981964-74990000 Eucalyptus grandis
Eucgr.E04232 2.0kb downstream 2.0kb downstream 2000 false Chr05: 74988001-74990000 Eucalyptus grandis
Eucgr.E04232 5.0kb upstream 5.0kb upstream 11037 true Chr05: 74976964-74988000 Eucalyptus grandis
Eucgr.E04232 5.0kb upstream 5.0kb upstream 5000 false Chr05: 74976964-74981963 Eucalyptus grandis
Eucgr.E04232 5.0kb downstream 5.0kb downstream 11037 true Chr05: 74981964-74993000 Eucalyptus grandis
Eucgr.E04232 5.0kb downstream 5.0kb downstream 5000 false Chr05: 74988001-74993000 Eucalyptus grandis
Eucgr.E04232 10.0kb upstream 10.0kb upstream 16037 true Chr05: 74971964-74988000 Eucalyptus grandis
Eucgr.E04232 10.0kb upstream 10.0kb upstream 10000 false Chr05: 74971964-74981963 Eucalyptus grandis
Eucgr.E04232 10.0kb downstream 10.0kb downstream 16037 true Chr05: 74981964-74998000 Eucalyptus grandis
Eucgr.E04232 10.0kb downstream 10.0kb downstream 10000 false Chr05: 74988001-74998000 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060454 5270 Rosid View MSA
123742883 5271 Pentapetalae View MSA
122794375 5272 Eudicot View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5426 0.0 40.5581    
cufflinks 9.13712 0.0 21.3713   Low
cufflinks 18.3021 0.0 53.9342    
cufflinks 9.57277 0.0 22.2794   Low
cufflinks 19.9916 0.0 56.2633    
cufflinks 38.5355 0.0 86.9183 High High

0 Strain