Gene : Eucgr.E04251 E. grandis v2.0
Defline:  (1 of 1) PTHR23089:SF3 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 Genomic Order:  3209
Name:  ? Eucgr.E04251 Secondary Identifier:  ? PAC:32031730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04251 0.5kb upstream 0.5kb upstream 3148 true Chr05: 75092504-75095651 Eucalyptus grandis
Eucgr.E04251 0.5kb upstream 0.5kb upstream 500 false Chr05: 75092504-75093003 Eucalyptus grandis
Eucgr.E04251 0.5kb downstream 0.5kb downstream 3148 true Chr05: 75093004-75096151 Eucalyptus grandis
Eucgr.E04251 0.5kb downstream 0.5kb downstream 500 false Chr05: 75095652-75096151 Eucalyptus grandis
Eucgr.E04251 1.0kb upstream 1.0kb upstream 3648 true Chr05: 75092004-75095651 Eucalyptus grandis
Eucgr.E04251 1.0kb upstream 1.0kb upstream 1000 false Chr05: 75092004-75093003 Eucalyptus grandis
Eucgr.E04251 1.0kb downstream 1.0kb downstream 3648 true Chr05: 75093004-75096651 Eucalyptus grandis
Eucgr.E04251 1.0kb downstream 1.0kb downstream 1000 false Chr05: 75095652-75096651 Eucalyptus grandis
Eucgr.E04251 2.0kb upstream 2.0kb upstream 4648 true Chr05: 75091004-75095651 Eucalyptus grandis
Eucgr.E04251 2.0kb upstream 2.0kb upstream 2000 false Chr05: 75091004-75093003 Eucalyptus grandis
Eucgr.E04251 2.0kb downstream 2.0kb downstream 4648 true Chr05: 75093004-75097651 Eucalyptus grandis
Eucgr.E04251 2.0kb downstream 2.0kb downstream 2000 false Chr05: 75095652-75097651 Eucalyptus grandis
Eucgr.E04251 5.0kb upstream 5.0kb upstream 7648 true Chr05: 75088004-75095651 Eucalyptus grandis
Eucgr.E04251 5.0kb upstream 5.0kb upstream 5000 false Chr05: 75088004-75093003 Eucalyptus grandis
Eucgr.E04251 5.0kb downstream 5.0kb downstream 7648 true Chr05: 75093004-75100651 Eucalyptus grandis
Eucgr.E04251 5.0kb downstream 5.0kb downstream 5000 false Chr05: 75095652-75100651 Eucalyptus grandis
Eucgr.E04251 10.0kb upstream 10.0kb upstream 12648 true Chr05: 75083004-75095651 Eucalyptus grandis
Eucgr.E04251 10.0kb upstream 10.0kb upstream 10000 false Chr05: 75083004-75093003 Eucalyptus grandis
Eucgr.E04251 10.0kb downstream 10.0kb downstream 12648 true Chr05: 75093004-75105651 Eucalyptus grandis
Eucgr.E04251 10.0kb downstream 10.0kb downstream 10000 false Chr05: 75095652-75105651 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063268 5270 Rosid View MSA
123738121 5271 Pentapetalae View MSA
122789246 5272 Eudicot View MSA
122042822 5273 Angiosperm View MSA
121347396 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9493 0.0 49.2826    
cufflinks 19.3369 0.0 45.6211    
cufflinks 20.3211 0.0 47.8111    
cufflinks 11.6319 0.0 29.3342   Low
cufflinks 12.8184 0.0 32.2823    
cufflinks 48.391 0.0 110.23 High High

0 Strain