Gene : Eucgr.E04109 E. grandis v2.0
Defline:  (1 of 80) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  2911
Name:  ? Eucgr.E04109 Secondary Identifier:  ? PAC:32029908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E04109 0.5kb upstream 0.5kb upstream 1061 true Chr05: 70211426-70212486 Eucalyptus grandis
Eucgr.E04109 0.5kb upstream 0.5kb upstream 500 false Chr05: 70211426-70211925 Eucalyptus grandis
Eucgr.E04109 0.5kb downstream 0.5kb downstream 1061 true Chr05: 70211926-70212986 Eucalyptus grandis
Eucgr.E04109 0.5kb downstream 0.5kb downstream 500 false Chr05: 70212487-70212986 Eucalyptus grandis
Eucgr.E04109 1.0kb upstream 1.0kb upstream 1561 true Chr05: 70210926-70212486 Eucalyptus grandis
Eucgr.E04109 1.0kb upstream 1.0kb upstream 1000 false Chr05: 70210926-70211925 Eucalyptus grandis
Eucgr.E04109 1.0kb downstream 1.0kb downstream 1561 true Chr05: 70211926-70213486 Eucalyptus grandis
Eucgr.E04109 1.0kb downstream 1.0kb downstream 1000 false Chr05: 70212487-70213486 Eucalyptus grandis
Eucgr.E04109 2.0kb upstream 2.0kb upstream 2561 true Chr05: 70209926-70212486 Eucalyptus grandis
Eucgr.E04109 2.0kb upstream 2.0kb upstream 2000 false Chr05: 70209926-70211925 Eucalyptus grandis
Eucgr.E04109 2.0kb downstream 2.0kb downstream 2561 true Chr05: 70211926-70214486 Eucalyptus grandis
Eucgr.E04109 2.0kb downstream 2.0kb downstream 2000 false Chr05: 70212487-70214486 Eucalyptus grandis
Eucgr.E04109 5.0kb upstream 5.0kb upstream 5561 true Chr05: 70206926-70212486 Eucalyptus grandis
Eucgr.E04109 5.0kb upstream 5.0kb upstream 5000 false Chr05: 70206926-70211925 Eucalyptus grandis
Eucgr.E04109 5.0kb downstream 5.0kb downstream 5561 true Chr05: 70211926-70217486 Eucalyptus grandis
Eucgr.E04109 5.0kb downstream 5.0kb downstream 5000 false Chr05: 70212487-70217486 Eucalyptus grandis
Eucgr.E04109 10.0kb upstream 10.0kb upstream 10561 true Chr05: 70201926-70212486 Eucalyptus grandis
Eucgr.E04109 10.0kb upstream 10.0kb upstream 10000 false Chr05: 70201926-70211925 Eucalyptus grandis
Eucgr.E04109 10.0kb downstream 10.0kb downstream 10561 true Chr05: 70211926-70222486 Eucalyptus grandis
Eucgr.E04109 10.0kb downstream 10.0kb downstream 10000 false Chr05: 70212487-70222486 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050602 5270 Rosid View MSA
123743309 5271 Pentapetalae View MSA
122795927 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain