Gene : Eucgr.F00463 E. grandis v2.0
Defline:  (1 of 2) PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I Genomic Order:  253
Name:  ? Eucgr.F00463 Secondary Identifier:  ? PAC:32056703
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5800 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00463 0.5kb upstream 0.5kb upstream 5621 true Chr06: 4134201-4139821 Eucalyptus grandis
Eucgr.F00463 0.5kb upstream 0.5kb upstream 500 false Chr06: 4134201-4134700 Eucalyptus grandis
Eucgr.F00463 0.5kb downstream 0.5kb downstream 5621 true Chr06: 4134701-4140321 Eucalyptus grandis
Eucgr.F00463 0.5kb downstream 0.5kb downstream 500 false Chr06: 4139822-4140321 Eucalyptus grandis
Eucgr.F00463 1.0kb upstream 1.0kb upstream 6121 true Chr06: 4133701-4139821 Eucalyptus grandis
Eucgr.F00463 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4133701-4134700 Eucalyptus grandis
Eucgr.F00463 1.0kb downstream 1.0kb downstream 6121 true Chr06: 4134701-4140821 Eucalyptus grandis
Eucgr.F00463 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4139822-4140821 Eucalyptus grandis
Eucgr.F00463 2.0kb upstream 2.0kb upstream 7121 true Chr06: 4132701-4139821 Eucalyptus grandis
Eucgr.F00463 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4132701-4134700 Eucalyptus grandis
Eucgr.F00463 2.0kb downstream 2.0kb downstream 7121 true Chr06: 4134701-4141821 Eucalyptus grandis
Eucgr.F00463 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4139822-4141821 Eucalyptus grandis
Eucgr.F00463 5.0kb upstream 5.0kb upstream 10121 true Chr06: 4129701-4139821 Eucalyptus grandis
Eucgr.F00463 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4129701-4134700 Eucalyptus grandis
Eucgr.F00463 5.0kb downstream 5.0kb downstream 10121 true Chr06: 4134701-4144821 Eucalyptus grandis
Eucgr.F00463 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4139822-4144821 Eucalyptus grandis
Eucgr.F00463 10.0kb upstream 10.0kb upstream 15121 true Chr06: 4124701-4139821 Eucalyptus grandis
Eucgr.F00463 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4124701-4134700 Eucalyptus grandis
Eucgr.F00463 10.0kb downstream 10.0kb downstream 15121 true Chr06: 4134701-4149821 Eucalyptus grandis
Eucgr.F00463 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4139822-4149821 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065627 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.70345 0.0 13.5779    
cufflinks 11.7958 0.0 29.3904   High
cufflinks 4.45174 0.0 12.9919   Low
cufflinks 7.40181 0.0 20.6043    
cufflinks 6.82669 0.0 15.9505    
cufflinks 5.21456 0.0 12.6305    

0 Strain