Gene : Eucgr.F00440 E. grandis v2.0
Defline:  (1 of 1) PF00646//PF10442 - F-box domain (F-box) // FIST C domain (FIST_C) Genomic Order:  274
Name:  ? Eucgr.F00440 Secondary Identifier:  ? PAC:32053214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00440 0.5kb upstream 0.5kb upstream 9241 true Chr06: 4371111-4380351 Eucalyptus grandis
Eucgr.F00440 0.5kb upstream 0.5kb upstream 500 false Chr06: 4371111-4371610 Eucalyptus grandis
Eucgr.F00440 0.5kb downstream 0.5kb downstream 9241 true Chr06: 4371611-4380851 Eucalyptus grandis
Eucgr.F00440 0.5kb downstream 0.5kb downstream 500 false Chr06: 4380352-4380851 Eucalyptus grandis
Eucgr.F00440 1.0kb upstream 1.0kb upstream 9741 true Chr06: 4370611-4380351 Eucalyptus grandis
Eucgr.F00440 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4370611-4371610 Eucalyptus grandis
Eucgr.F00440 1.0kb downstream 1.0kb downstream 9741 true Chr06: 4371611-4381351 Eucalyptus grandis
Eucgr.F00440 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4380352-4381351 Eucalyptus grandis
Eucgr.F00440 2.0kb upstream 2.0kb upstream 10741 true Chr06: 4369611-4380351 Eucalyptus grandis
Eucgr.F00440 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4369611-4371610 Eucalyptus grandis
Eucgr.F00440 2.0kb downstream 2.0kb downstream 10741 true Chr06: 4371611-4382351 Eucalyptus grandis
Eucgr.F00440 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4380352-4382351 Eucalyptus grandis
Eucgr.F00440 5.0kb upstream 5.0kb upstream 13741 true Chr06: 4366611-4380351 Eucalyptus grandis
Eucgr.F00440 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4366611-4371610 Eucalyptus grandis
Eucgr.F00440 5.0kb downstream 5.0kb downstream 13741 true Chr06: 4371611-4385351 Eucalyptus grandis
Eucgr.F00440 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4380352-4385351 Eucalyptus grandis
Eucgr.F00440 10.0kb upstream 10.0kb upstream 18741 true Chr06: 4361611-4380351 Eucalyptus grandis
Eucgr.F00440 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4361611-4371610 Eucalyptus grandis
Eucgr.F00440 10.0kb downstream 10.0kb downstream 18741 true Chr06: 4371611-4390351 Eucalyptus grandis
Eucgr.F00440 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4380352-4390351 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066508 5270 Rosid View MSA
123742039 5271 Pentapetalae View MSA
122794663 5272 Eudicot View MSA
122042644 5273 Angiosperm View MSA
121343954 5274 Embryophyte View MSA
123379948 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.8343 0.0 114.567 High  
cufflinks 24.2735 0.0 53.6941    
cufflinks 27.625 0.0 61.1786 High  
cufflinks 23.273 0.0 51.4814    
cufflinks 11.0237 0.0 24.7757   Low
cufflinks 117.944 0.0 282.67 High High

0 Strain