Gene : Eucgr.F00418 E. grandis v2.0
Defline:  (1 of 1) PTHR11002:SF19 - CARBONIC ANHYDRASE Genomic Order:  294
Name:  ? Eucgr.F00418 Secondary Identifier:  ? PAC:32054701
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYANCAT-PWY Eucalyptus grandis pathologic  
Egrandis PWY-241 Eucalyptus grandis pathologic  
Egrandis PWY-7115 Eucalyptus grandis pathologic  
Egrandis PWY-7117 Eucalyptus grandis pathologic  
Egrandis PWYQT-4429 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00418 0.5kb upstream 0.5kb upstream 6978 true Chr06: 4656261-4663238 Eucalyptus grandis
Eucgr.F00418 0.5kb upstream 0.5kb upstream 500 false Chr06: 4656261-4656760 Eucalyptus grandis
Eucgr.F00418 0.5kb downstream 0.5kb downstream 6978 true Chr06: 4656761-4663738 Eucalyptus grandis
Eucgr.F00418 0.5kb downstream 0.5kb downstream 500 false Chr06: 4663239-4663738 Eucalyptus grandis
Eucgr.F00418 1.0kb upstream 1.0kb upstream 7478 true Chr06: 4655761-4663238 Eucalyptus grandis
Eucgr.F00418 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4655761-4656760 Eucalyptus grandis
Eucgr.F00418 1.0kb downstream 1.0kb downstream 7478 true Chr06: 4656761-4664238 Eucalyptus grandis
Eucgr.F00418 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4663239-4664238 Eucalyptus grandis
Eucgr.F00418 2.0kb upstream 2.0kb upstream 8478 true Chr06: 4654761-4663238 Eucalyptus grandis
Eucgr.F00418 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4654761-4656760 Eucalyptus grandis
Eucgr.F00418 2.0kb downstream 2.0kb downstream 8478 true Chr06: 4656761-4665238 Eucalyptus grandis
Eucgr.F00418 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4663239-4665238 Eucalyptus grandis
Eucgr.F00418 5.0kb upstream 5.0kb upstream 11478 true Chr06: 4651761-4663238 Eucalyptus grandis
Eucgr.F00418 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4651761-4656760 Eucalyptus grandis
Eucgr.F00418 5.0kb downstream 5.0kb downstream 11478 true Chr06: 4656761-4668238 Eucalyptus grandis
Eucgr.F00418 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4663239-4668238 Eucalyptus grandis
Eucgr.F00418 10.0kb upstream 10.0kb upstream 16478 true Chr06: 4646761-4663238 Eucalyptus grandis
Eucgr.F00418 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4646761-4656760 Eucalyptus grandis
Eucgr.F00418 10.0kb downstream 10.0kb downstream 16478 true Chr06: 4656761-4673238 Eucalyptus grandis
Eucgr.F00418 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4663239-4673238 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069965 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89253 0.0 8.05262    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.94213 0.0 10.2687    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.423474 0.0 1.74214 Low Low
cufflinks 36.9667 0.0 100.191 High High

0 Strain