Gene : Eucgr.F00379 E. grandis v2.0
Defline:  (1 of 2) 2.4.2.29 - tRNA-guanine(34) transglycosylase / tRNA transglycosylase Genomic Order:  329
Name:  ? Eucgr.F00379 Secondary Identifier:  ? PAC:32056674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00379 0.5kb upstream 0.5kb upstream 8542 true Chr06: 4989763-4998304 Eucalyptus grandis
Eucgr.F00379 0.5kb upstream 0.5kb upstream 500 false Chr06: 4989763-4990262 Eucalyptus grandis
Eucgr.F00379 0.5kb downstream 0.5kb downstream 8542 true Chr06: 4990263-4998804 Eucalyptus grandis
Eucgr.F00379 0.5kb downstream 0.5kb downstream 500 false Chr06: 4998305-4998804 Eucalyptus grandis
Eucgr.F00379 1.0kb upstream 1.0kb upstream 9042 true Chr06: 4989263-4998304 Eucalyptus grandis
Eucgr.F00379 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4989263-4990262 Eucalyptus grandis
Eucgr.F00379 1.0kb downstream 1.0kb downstream 9042 true Chr06: 4990263-4999304 Eucalyptus grandis
Eucgr.F00379 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4998305-4999304 Eucalyptus grandis
Eucgr.F00379 2.0kb upstream 2.0kb upstream 10042 true Chr06: 4988263-4998304 Eucalyptus grandis
Eucgr.F00379 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4988263-4990262 Eucalyptus grandis
Eucgr.F00379 2.0kb downstream 2.0kb downstream 10042 true Chr06: 4990263-5000304 Eucalyptus grandis
Eucgr.F00379 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4998305-5000304 Eucalyptus grandis
Eucgr.F00379 5.0kb upstream 5.0kb upstream 13042 true Chr06: 4985263-4998304 Eucalyptus grandis
Eucgr.F00379 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4985263-4990262 Eucalyptus grandis
Eucgr.F00379 5.0kb downstream 5.0kb downstream 13042 true Chr06: 4990263-5003304 Eucalyptus grandis
Eucgr.F00379 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4998305-5003304 Eucalyptus grandis
Eucgr.F00379 10.0kb upstream 10.0kb upstream 18042 true Chr06: 4980263-4998304 Eucalyptus grandis
Eucgr.F00379 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4980263-4990262 Eucalyptus grandis
Eucgr.F00379 10.0kb downstream 10.0kb downstream 18042 true Chr06: 4990263-5008304 Eucalyptus grandis
Eucgr.F00379 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4998305-5008304 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070956 5270 Rosid View MSA
123742593 5271 Pentapetalae View MSA
122795141 5272 Eudicot View MSA
122048570 5273 Angiosperm View MSA
121348246 5274 Embryophyte View MSA
123425723 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00826 0.0 12.6967    
cufflinks 6.35085 0.0 19.2092    
cufflinks 7.96897 0.0 23.3428   High
cufflinks 3.45467 0.0 12.4158   Low
cufflinks 3.74892 0.0 12.5135   Low
cufflinks 6.26648 0.0 16.3724    

0 Strain