Gene : Eucgr.F00197 E. grandis v2.0
Defline:  (1 of 180) PF02458 - Transferase family (Transferase) Genomic Order:  128
Name:  ? Eucgr.F00197 Secondary Identifier:  ? PAC:32055410
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-6040 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00197 0.5kb upstream 0.5kb upstream 2500 true Chr06: 2653549-2656048 Eucalyptus grandis
Eucgr.F00197 0.5kb upstream 0.5kb upstream 500 false Chr06: 2655549-2656048 Eucalyptus grandis
Eucgr.F00197 0.5kb downstream 0.5kb downstream 2500 true Chr06: 2653049-2655548 Eucalyptus grandis
Eucgr.F00197 0.5kb downstream 0.5kb downstream 500 false Chr06: 2653049-2653548 Eucalyptus grandis
Eucgr.F00197 1.0kb upstream 1.0kb upstream 3000 true Chr06: 2653549-2656548 Eucalyptus grandis
Eucgr.F00197 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2655549-2656548 Eucalyptus grandis
Eucgr.F00197 1.0kb downstream 1.0kb downstream 3000 true Chr06: 2652549-2655548 Eucalyptus grandis
Eucgr.F00197 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2652549-2653548 Eucalyptus grandis
Eucgr.F00197 2.0kb upstream 2.0kb upstream 4000 true Chr06: 2653549-2657548 Eucalyptus grandis
Eucgr.F00197 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2655549-2657548 Eucalyptus grandis
Eucgr.F00197 2.0kb downstream 2.0kb downstream 4000 true Chr06: 2651549-2655548 Eucalyptus grandis
Eucgr.F00197 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2651549-2653548 Eucalyptus grandis
Eucgr.F00197 5.0kb upstream 5.0kb upstream 7000 true Chr06: 2653549-2660548 Eucalyptus grandis
Eucgr.F00197 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2655549-2660548 Eucalyptus grandis
Eucgr.F00197 5.0kb downstream 5.0kb downstream 7000 true Chr06: 2648549-2655548 Eucalyptus grandis
Eucgr.F00197 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2648549-2653548 Eucalyptus grandis
Eucgr.F00197 10.0kb upstream 10.0kb upstream 12000 true Chr06: 2653549-2665548 Eucalyptus grandis
Eucgr.F00197 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2655549-2665548 Eucalyptus grandis
Eucgr.F00197 10.0kb downstream 10.0kb downstream 12000 true Chr06: 2643549-2655548 Eucalyptus grandis
Eucgr.F00197 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2643549-2653548 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27855 0.0 6.4662    
cufflinks 0.867475 0.0 2.7928    
cufflinks 4.14186 0.0 11.2167    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0844575 0.0 0.458996 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain